Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.44■□□□□ 0.7
NOTCH4Q99466 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.44■□□□□ 0.7
NOTCH4Q99466 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NOTCH4Q99466 GPR32P1-201ENST00000601788 811 ntBASIC19.44■□□□□ 0.7
NOTCH4Q99466 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
NOTCH4Q99466 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.44■□□□□ 0.7
NOTCH4Q99466 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
NOTCH4Q99466 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NOTCH4Q99466 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.44■□□□□ 0.7
NOTCH4Q99466 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NOTCH4Q99466 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NOTCH4Q99466 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NOTCH4Q99466 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NOTCH4Q99466 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.44■□□□□ 0.7
NOTCH4Q99466 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.44■□□□□ 0.7
NOTCH4Q99466 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NOTCH4Q99466 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NOTCH4Q99466 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.44■□□□□ 0.7
NOTCH4Q99466 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.44■□□□□ 0.7
NOTCH4Q99466 AC104692.2-201ENST00000603054 253 ntBASIC19.44■□□□□ 0.7
NOTCH4Q99466 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NOTCH4Q99466 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NOTCH4Q99466 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NOTCH4Q99466 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NOTCH4Q99466 AC074051.2-201ENST00000565115 352 ntBASIC19.43■□□□□ 0.7
NOTCH4Q99466 SLC25A6P4-201ENST00000586535 553 ntBASIC19.43■□□□□ 0.7
NOTCH4Q99466 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.43■□□□□ 0.7
NOTCH4Q99466 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NOTCH4Q99466 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NOTCH4Q99466 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NOTCH4Q99466 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NOTCH4Q99466 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
NOTCH4Q99466 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NOTCH4Q99466 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.43■□□□□ 0.7
NOTCH4Q99466 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NOTCH4Q99466 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.42■□□□□ 0.7
NOTCH4Q99466 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NOTCH4Q99466 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NOTCH4Q99466 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NOTCH4Q99466 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.42■□□□□ 0.7
NOTCH4Q99466 KRT8P7-201ENST00000533003 1432 ntBASIC19.42■□□□□ 0.7
NOTCH4Q99466 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NOTCH4Q99466 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NOTCH4Q99466 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
NOTCH4Q99466 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NOTCH4Q99466 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.42■□□□□ 0.7
NOTCH4Q99466 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.42■□□□□ 0.7
NOTCH4Q99466 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NOTCH4Q99466 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NOTCH4Q99466 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NOTCH4Q99466 KRT18P1-202ENST00000452408 1331 ntBASIC19.42■□□□□ 0.7
NOTCH4Q99466 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
NOTCH4Q99466 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NOTCH4Q99466 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.42■□□□□ 0.7
NOTCH4Q99466 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NOTCH4Q99466 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NOTCH4Q99466 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.42■□□□□ 0.7
NOTCH4Q99466 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
NOTCH4Q99466 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.41■□□□□ 0.7
NOTCH4Q99466 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NOTCH4Q99466 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NOTCH4Q99466 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
NOTCH4Q99466 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.41■□□□□ 0.7
NOTCH4Q99466 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.41■□□□□ 0.7
NOTCH4Q99466 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.41■□□□□ 0.7
NOTCH4Q99466 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NOTCH4Q99466 AC233702.3-201ENST00000578656 1387 ntBASIC19.41■□□□□ 0.7
NOTCH4Q99466 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.41■□□□□ 0.7
NOTCH4Q99466 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NOTCH4Q99466 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.41■□□□□ 0.7
NOTCH4Q99466 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NOTCH4Q99466 TSPY12P-201ENST00000421279 868 ntBASIC19.41■□□□□ 0.7
NOTCH4Q99466 AL845331.1-201ENST00000424978 1190 ntBASIC19.41■□□□□ 0.7
NOTCH4Q99466 AC009078.2-202ENST00000463353 338 ntBASIC19.41■□□□□ 0.7
NOTCH4Q99466 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.41■□□□□ 0.7
NOTCH4Q99466 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.41■□□□□ 0.7
NOTCH4Q99466 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.41■□□□□ 0.7
NOTCH4Q99466 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.41■□□□□ 0.7
NOTCH4Q99466 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.41■□□□□ 0.7
NOTCH4Q99466 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NOTCH4Q99466 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.41■□□□□ 0.7
NOTCH4Q99466 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NOTCH4Q99466 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NOTCH4Q99466 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.41■□□□□ 0.7
NOTCH4Q99466 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NOTCH4Q99466 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NOTCH4Q99466 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.41■□□□□ 0.7
NOTCH4Q99466 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NOTCH4Q99466 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NOTCH4Q99466 AP000347.1-202ENST00000435868 847 ntBASIC19.41■□□□□ 0.7
NOTCH4Q99466 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.41■□□□□ 0.7
NOTCH4Q99466 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.41■□□□□ 0.7
NOTCH4Q99466 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NOTCH4Q99466 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NOTCH4Q99466 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NOTCH4Q99466 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NOTCH4Q99466 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NOTCH4Q99466 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
NOTCH4Q99466 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.4■□□□□ 0.7
NOTCH4Q99466 AC034236.2-201ENST00000606662 1610 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms