Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNX27Q96L92 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SNX27Q96L92 LINC01238-205ENST00000567549 1107 ntBASIC20.35■□□□□ 0.85
SNX27Q96L92 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.35■□□□□ 0.85
SNX27Q96L92 MYC-208ENST00000641036 567 ntBASIC20.35■□□□□ 0.85
SNX27Q96L92 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.35■□□□□ 0.85
SNX27Q96L92 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.35■□□□□ 0.85
SNX27Q96L92 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNX27Q96L92 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNX27Q96L92 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.35■□□□□ 0.85
SNX27Q96L92 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNX27Q96L92 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNX27Q96L92 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX27Q96L92 AC116562.4-201ENST00000641316 2276 ntBASIC20.34■□□□□ 0.85
SNX27Q96L92 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX27Q96L92 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SNX27Q96L92 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.34■□□□□ 0.85
SNX27Q96L92 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SNX27Q96L92 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX27Q96L92 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SNX27Q96L92 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SNX27Q96L92 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.34■□□□□ 0.85
SNX27Q96L92 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.34■□□□□ 0.85
SNX27Q96L92 AC092647.4-201ENST00000457211 535 ntBASIC20.34■□□□□ 0.85
SNX27Q96L92 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNX27Q96L92 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.34■□□□□ 0.85
SNX27Q96L92 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.34■□□□□ 0.85
SNX27Q96L92 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNX27Q96L92 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
SNX27Q96L92 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.34■□□□□ 0.85
SNX27Q96L92 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.34■□□□□ 0.85
SNX27Q96L92 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.34■□□□□ 0.85
SNX27Q96L92 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNX27Q96L92 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.34■□□□□ 0.85
SNX27Q96L92 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNX27Q96L92 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNX27Q96L92 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.33■□□□□ 0.85
SNX27Q96L92 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SNX27Q96L92 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNX27Q96L92 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SNX27Q96L92 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SNX27Q96L92 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.33■□□□□ 0.85
SNX27Q96L92 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.33■□□□□ 0.85
SNX27Q96L92 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.33■□□□□ 0.85
SNX27Q96L92 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNX27Q96L92 HOMER2P1-201ENST00000455653 964 ntBASIC20.33■□□□□ 0.85
SNX27Q96L92 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.33■□□□□ 0.85
SNX27Q96L92 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.33■□□□□ 0.85
SNX27Q96L92 GCSHP2-201ENST00000560971 527 ntBASIC20.33■□□□□ 0.85
SNX27Q96L92 LINC02084-201ENST00000606069 1096 ntBASIC20.33■□□□□ 0.85
SNX27Q96L92 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.33■□□□□ 0.85
SNX27Q96L92 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SNX27Q96L92 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.33■□□□□ 0.84
SNX27Q96L92 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SNX27Q96L92 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNX27Q96L92 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNX27Q96L92 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.33■□□□□ 0.84
SNX27Q96L92 AC008556.1-201ENST00000610908 2040 ntBASIC20.32■□□□□ 0.84
SNX27Q96L92 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNX27Q96L92 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SNX27Q96L92 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX27Q96L92 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SNX27Q96L92 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX27Q96L92 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.32■□□□□ 0.84
SNX27Q96L92 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX27Q96L92 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX27Q96L92 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.32■□□□□ 0.84
SNX27Q96L92 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX27Q96L92 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.32■□□□□ 0.84
SNX27Q96L92 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
SNX27Q96L92 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.32■□□□□ 0.84
SNX27Q96L92 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.32■□□□□ 0.84
SNX27Q96L92 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
SNX27Q96L92 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
SNX27Q96L92 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SNX27Q96L92 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX27Q96L92 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.32■□□□□ 0.84
SNX27Q96L92 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX27Q96L92 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.32■□□□□ 0.84
SNX27Q96L92 AL161938.1-201ENST00000569833 2180 ntBASIC20.32■□□□□ 0.84
SNX27Q96L92 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SNX27Q96L92 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX27Q96L92 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNX27Q96L92 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SNX27Q96L92 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
SNX27Q96L92 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX27Q96L92 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNX27Q96L92 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNX27Q96L92 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX27Q96L92 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX27Q96L92 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX27Q96L92 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX27Q96L92 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.31■□□□□ 0.84
SNX27Q96L92 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SNX27Q96L92 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX27Q96L92 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX27Q96L92 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.31■□□□□ 0.84
SNX27Q96L92 KRT18P38-201ENST00000449496 1282 ntBASIC20.31■□□□□ 0.84
SNX27Q96L92 AL359075.1-203ENST00000462729 1002 ntBASIC20.31■□□□□ 0.84
SNX27Q96L92 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms