Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPG11Q96JI7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPG11Q96JI7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPG11Q96JI7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.97■□□□□ 0.15
SPG11Q96JI7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.97■□□□□ 0.15
SPG11Q96JI7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SPG11Q96JI7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPG11Q96JI7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.97■□□□□ 0.15
SPG11Q96JI7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPG11Q96JI7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.97■□□□□ 0.15
SPG11Q96JI7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SPG11Q96JI7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SPG11Q96JI7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.96■□□□□ 0.15
SPG11Q96JI7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
SPG11Q96JI7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.96■□□□□ 0.15
SPG11Q96JI7 IGHV3-47-201ENST00000425060 335 ntBASIC15.96■□□□□ 0.15
SPG11Q96JI7 SAPCD2P3-201ENST00000455031 850 ntBASIC15.96■□□□□ 0.15
SPG11Q96JI7 AC091607.1-201ENST00000490318 1060 ntBASIC15.96■□□□□ 0.15
SPG11Q96JI7 PGAM5P1-201ENST00000518923 814 ntBASIC15.96■□□□□ 0.15
SPG11Q96JI7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.96■□□□□ 0.15
SPG11Q96JI7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SPG11Q96JI7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SPG11Q96JI7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SPG11Q96JI7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
SPG11Q96JI7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SPG11Q96JI7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SPG11Q96JI7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SPG11Q96JI7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.96■□□□□ 0.15
SPG11Q96JI7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
SPG11Q96JI7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SPG11Q96JI7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SPG11Q96JI7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.96■□□□□ 0.15
SPG11Q96JI7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.96■□□□□ 0.15
SPG11Q96JI7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SPG11Q96JI7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SPG11Q96JI7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.96■□□□□ 0.15
SPG11Q96JI7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.96■□□□□ 0.15
SPG11Q96JI7 TERC-201ENST00000602385 541 ntBASIC15.96■□□□□ 0.15
SPG11Q96JI7 TP73-AS1-207ENST00000624167 988 ntBASIC15.96■□□□□ 0.15
SPG11Q96JI7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
SPG11Q96JI7 AC009237.14-201ENST00000609975 1594 ntBASIC15.96■□□□□ 0.14
SPG11Q96JI7 ZNF815P-204ENST00000434898 1737 ntBASIC15.96■□□□□ 0.14
SPG11Q96JI7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
SPG11Q96JI7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SPG11Q96JI7 AP005212.1-201ENST00000581547 1997 ntBASIC15.96■□□□□ 0.14
SPG11Q96JI7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.96■□□□□ 0.14
SPG11Q96JI7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.96■□□□□ 0.14
SPG11Q96JI7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SPG11Q96JI7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
SPG11Q96JI7 AC007375.3-201ENST00000600936 2314 ntBASIC15.95■□□□□ 0.14
SPG11Q96JI7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPG11Q96JI7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPG11Q96JI7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SPG11Q96JI7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPG11Q96JI7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.95■□□□□ 0.14
SPG11Q96JI7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPG11Q96JI7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPG11Q96JI7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPG11Q96JI7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
SPG11Q96JI7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.95■□□□□ 0.14
SPG11Q96JI7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.95■□□□□ 0.14
SPG11Q96JI7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.95■□□□□ 0.14
SPG11Q96JI7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.95■□□□□ 0.14
SPG11Q96JI7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SPG11Q96JI7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.95■□□□□ 0.14
SPG11Q96JI7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.95■□□□□ 0.14
SPG11Q96JI7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SPG11Q96JI7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPG11Q96JI7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPG11Q96JI7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPG11Q96JI7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPG11Q96JI7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SPG11Q96JI7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SPG11Q96JI7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.95■□□□□ 0.14
SPG11Q96JI7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPG11Q96JI7 AKR1C7P-201ENST00000305623 895 ntBASIC15.95■□□□□ 0.14
SPG11Q96JI7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPG11Q96JI7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.95■□□□□ 0.14
SPG11Q96JI7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.95■□□□□ 0.14
SPG11Q96JI7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SPG11Q96JI7 SDHAP1-207ENST00000440850 2000 ntBASIC15.95■□□□□ 0.14
SPG11Q96JI7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPG11Q96JI7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
SPG11Q96JI7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPG11Q96JI7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.94■□□□□ 0.14
SPG11Q96JI7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.94■□□□□ 0.14
SPG11Q96JI7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPG11Q96JI7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPG11Q96JI7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SPG11Q96JI7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.94■□□□□ 0.14
SPG11Q96JI7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.94■□□□□ 0.14
SPG11Q96JI7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPG11Q96JI7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SPG11Q96JI7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.94■□□□□ 0.14
SPG11Q96JI7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPG11Q96JI7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.94■□□□□ 0.14
SPG11Q96JI7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
SPG11Q96JI7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.94■□□□□ 0.14
SPG11Q96JI7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.94■□□□□ 0.14
SPG11Q96JI7 AC148477.8-201ENST00000624298 468 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms