Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 HLA-B-256ENST00000639848 1089 ntBASIC17.94■□□□□ 0.46
LRRC58Q96CX6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.93■□□□□ 0.46
LRRC58Q96CX6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 AL137784.2-201ENST00000607332 1000 ntBASIC17.93■□□□□ 0.46
LRRC58Q96CX6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 AC090340.1-201ENST00000620778 4980 ntBASIC17.93■□□□□ 0.46
LRRC58Q96CX6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.93■□□□□ 0.46
LRRC58Q96CX6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 AC026185.1-201ENST00000445748 174 ntBASIC17.92■□□□□ 0.46
LRRC58Q96CX6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 AL160286.2-201ENST00000567150 934 ntBASIC17.92■□□□□ 0.46
LRRC58Q96CX6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 AC092437.1-201ENST00000624794 1048 ntBASIC17.92■□□□□ 0.46
LRRC58Q96CX6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRC58Q96CX6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 AL499627.1-201ENST00000569373 2188 ntBASIC17.91■□□□□ 0.46
LRRC58Q96CX6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms