Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 AC092329.2-201ENST00000598402 547 ntBASIC29.31■■■□□ 2.28
CASKIN1Q8WXD9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CASKIN1Q8WXD9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CASKIN1Q8WXD9 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC29.31■■■□□ 2.28
CASKIN1Q8WXD9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CASKIN1Q8WXD9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CASKIN1Q8WXD9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC29.31■■■□□ 2.28
CASKIN1Q8WXD9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CASKIN1Q8WXD9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CASKIN1Q8WXD9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
CASKIN1Q8WXD9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
CASKIN1Q8WXD9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CASKIN1Q8WXD9 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CASKIN1Q8WXD9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CASKIN1Q8WXD9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC29.3■■■□□ 2.28
CASKIN1Q8WXD9 AL390719.2-201ENST00000606993 987 ntBASIC29.3■■■□□ 2.28
CASKIN1Q8WXD9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CASKIN1Q8WXD9 MTMR9LP-203ENST00000426597 1545 ntBASIC29.3■■■□□ 2.28
CASKIN1Q8WXD9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CASKIN1Q8WXD9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CASKIN1Q8WXD9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC29.3■■■□□ 2.28
CASKIN1Q8WXD9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CASKIN1Q8WXD9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC29.3■■■□□ 2.28
CASKIN1Q8WXD9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CASKIN1Q8WXD9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC29.3■■■□□ 2.28
CASKIN1Q8WXD9 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CASKIN1Q8WXD9 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CASKIN1Q8WXD9 DRAXINP1-201ENST00000437611 948 ntBASIC29.29■■■□□ 2.28
CASKIN1Q8WXD9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC29.29■■■□□ 2.28
CASKIN1Q8WXD9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC29.29■■■□□ 2.28
CASKIN1Q8WXD9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC29.29■■■□□ 2.28
CASKIN1Q8WXD9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC29.29■■■□□ 2.28
CASKIN1Q8WXD9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
CASKIN1Q8WXD9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
CASKIN1Q8WXD9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CASKIN1Q8WXD9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
CASKIN1Q8WXD9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC29.29■■■□□ 2.28
CASKIN1Q8WXD9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC29.29■■■□□ 2.28
CASKIN1Q8WXD9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CASKIN1Q8WXD9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CASKIN1Q8WXD9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CASKIN1Q8WXD9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CASKIN1Q8WXD9 PPIH-202ENST00000372549 327 ntTSL 3 BASIC29.28■■■□□ 2.28
CASKIN1Q8WXD9 TSPY22P-201ENST00000427496 604 ntBASIC29.28■■■□□ 2.28
CASKIN1Q8WXD9 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC29.28■■■□□ 2.28
CASKIN1Q8WXD9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC29.28■■■□□ 2.28
CASKIN1Q8WXD9 CIB2-208ENST00000560618 804 ntTSL 2 BASIC29.28■■■□□ 2.28
CASKIN1Q8WXD9 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC29.28■■■□□ 2.28
CASKIN1Q8WXD9 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC29.28■■■□□ 2.28
CASKIN1Q8WXD9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC29.28■■■□□ 2.28
CASKIN1Q8WXD9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC29.28■■■□□ 2.28
CASKIN1Q8WXD9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CASKIN1Q8WXD9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC29.28■■■□□ 2.28
CASKIN1Q8WXD9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CASKIN1Q8WXD9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CASKIN1Q8WXD9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC29.28■■■□□ 2.28
CASKIN1Q8WXD9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC29.28■■■□□ 2.28
CASKIN1Q8WXD9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
CASKIN1Q8WXD9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
CASKIN1Q8WXD9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC29.28■■■□□ 2.28
CASKIN1Q8WXD9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC29.28■■■□□ 2.28
CASKIN1Q8WXD9 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
CASKIN1Q8WXD9 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
CASKIN1Q8WXD9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC29.28■■■□□ 2.28
CASKIN1Q8WXD9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CASKIN1Q8WXD9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
CASKIN1Q8WXD9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC29.27■■■□□ 2.28
CASKIN1Q8WXD9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
CASKIN1Q8WXD9 CYP51A1P1-201ENST00000492267 1507 ntBASIC29.27■■■□□ 2.28
CASKIN1Q8WXD9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
CASKIN1Q8WXD9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
CASKIN1Q8WXD9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CASKIN1Q8WXD9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC29.27■■■□□ 2.28
CASKIN1Q8WXD9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC29.27■■■□□ 2.28
CASKIN1Q8WXD9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC29.27■■■□□ 2.28
CASKIN1Q8WXD9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
CASKIN1Q8WXD9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CASKIN1Q8WXD9 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC29.27■■■□□ 2.28
CASKIN1Q8WXD9 MIR3652-201ENST00000579335 131 ntBASIC29.27■■■□□ 2.28
CASKIN1Q8WXD9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC29.27■■■□□ 2.28
CASKIN1Q8WXD9 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC29.27■■■□□ 2.28
CASKIN1Q8WXD9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC29.27■■■□□ 2.28
CASKIN1Q8WXD9 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
CASKIN1Q8WXD9 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC29.27■■■□□ 2.28
CASKIN1Q8WXD9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC29.27■■■□□ 2.28
CASKIN1Q8WXD9 HEIH-201ENST00000623091 1652 ntBASIC29.27■■■□□ 2.28
CASKIN1Q8WXD9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
CASKIN1Q8WXD9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CASKIN1Q8WXD9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CASKIN1Q8WXD9 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CASKIN1Q8WXD9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC29.26■■■□□ 2.27
CASKIN1Q8WXD9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
CASKIN1Q8WXD9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CASKIN1Q8WXD9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CASKIN1Q8WXD9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CASKIN1Q8WXD9 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC29.26■■■□□ 2.27
CASKIN1Q8WXD9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC29.26■■■□□ 2.27
CASKIN1Q8WXD9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC29.26■■■□□ 2.27
CASKIN1Q8WXD9 Z98044.1-201ENST00000632503 1764 ntBASIC29.26■■■□□ 2.27
CASKIN1Q8WXD9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms