Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC22.1■■□□□ 1.13
SMARCC2Q8TAQ2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC22.1■■□□□ 1.13
SMARCC2Q8TAQ2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
SMARCC2Q8TAQ2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMARCC2Q8TAQ2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMARCC2Q8TAQ2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 WIZP1-201ENST00000531444 2299 ntBASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 FAM207BP-201ENST00000447172 505 ntBASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 AC008040.2-201ENST00000461049 708 ntBASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 AC091390.4-202ENST00000476426 537 ntBASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 AC097488.1-201ENST00000507834 756 ntBASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC22.09■■□□□ 1.13
SMARCC2Q8TAQ2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC22.08■■□□□ 1.13
SMARCC2Q8TAQ2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC22.08■■□□□ 1.13
SMARCC2Q8TAQ2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SMARCC2Q8TAQ2 AC009113.1-201ENST00000570267 2443 ntBASIC22.08■■□□□ 1.13
SMARCC2Q8TAQ2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SMARCC2Q8TAQ2 KRT8P9-201ENST00000558927 1449 ntBASIC22.08■■□□□ 1.13
SMARCC2Q8TAQ2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SMARCC2Q8TAQ2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SMARCC2Q8TAQ2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SMARCC2Q8TAQ2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC22.08■■□□□ 1.13
SMARCC2Q8TAQ2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
SMARCC2Q8TAQ2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
SMARCC2Q8TAQ2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC22.08■■□□□ 1.13
SMARCC2Q8TAQ2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC22.08■■□□□ 1.13
SMARCC2Q8TAQ2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC22.08■■□□□ 1.13
SMARCC2Q8TAQ2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.08■■□□□ 1.13
SMARCC2Q8TAQ2 SLC25A1P4-201ENST00000567977 778 ntBASIC22.08■■□□□ 1.13
SMARCC2Q8TAQ2 LINC01023-201ENST00000606054 436 ntBASIC22.08■■□□□ 1.13
SMARCC2Q8TAQ2 AP000692.2-201ENST00000608391 879 ntBASIC22.08■■□□□ 1.13
SMARCC2Q8TAQ2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SMARCC2Q8TAQ2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SMARCC2Q8TAQ2 ANO7L1-203ENST00000602586 1720 ntBASIC22.08■■□□□ 1.12
SMARCC2Q8TAQ2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SMARCC2Q8TAQ2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC22.08■■□□□ 1.12
SMARCC2Q8TAQ2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
SMARCC2Q8TAQ2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC22.08■■□□□ 1.12
SMARCC2Q8TAQ2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SMARCC2Q8TAQ2 NEFHP1-201ENST00000412845 2629 ntBASIC22.08■■□□□ 1.12
SMARCC2Q8TAQ2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 CRYGFP-201ENST00000418459 633 ntBASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
SMARCC2Q8TAQ2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms