Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PCDH19Q8TAB3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 AL355355.2-201ENST00000442321 338 ntBASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 SLC25A1P4-201ENST00000567977 778 ntBASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH19Q8TAB3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 TSPY15P-201ENST00000457163 923 ntBASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 AC009113.1-201ENST00000570267 2443 ntBASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH19Q8TAB3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 AC211429.1-201ENST00000415277 523 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms