Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 AC026366.1-201ENST00000488803 879 ntBASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 AL160286.2-201ENST00000567150 934 ntBASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN22Q8N7P3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 MTDHP1-201ENST00000605323 784 ntBASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 NBPF21P-201ENST00000425093 1451 ntBASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN22Q8N7P3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 PRKY-204ENST00000533551 1019 ntBASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 C1QL1P1-201ENST00000568105 661 ntBASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 HLA-A-209ENST00000638375 975 ntBASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 AL023875.1-201ENST00000640777 796 ntBASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
CLDN22Q8N7P3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDN22Q8N7P3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN22Q8N7P3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN22Q8N7P3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN22Q8N7P3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN22Q8N7P3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms