Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAM1L1Q8N609 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.64■□□□□ 0.57
TRAM1L1Q8N609 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAM1L1Q8N609 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAM1L1Q8N609 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAM1L1Q8N609 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAM1L1Q8N609 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.64■□□□□ 0.57
TRAM1L1Q8N609 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAM1L1Q8N609 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TRAM1L1Q8N609 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
TRAM1L1Q8N609 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAM1L1Q8N609 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAM1L1Q8N609 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 AL138966.2-201ENST00000621997 464 ntBASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAM1L1Q8N609 AC008556.1-201ENST00000610908 2040 ntBASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 RCN1P1-201ENST00000400413 996 ntBASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 AC092865.7-201ENST00000641832 219 ntBASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 AC006333.2-201ENST00000607957 2099 ntBASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAM1L1Q8N609 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 AC036111.1-201ENST00000533973 1582 ntBASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 AC141257.4-201ENST00000634557 245 ntBASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 AC136944.6-201ENST00000634818 245 ntBASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAM1L1Q8N609 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAM1L1Q8N609 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAM1L1Q8N609 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.6■□□□□ 0.57
TRAM1L1Q8N609 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.6■□□□□ 0.57
TRAM1L1Q8N609 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAM1L1Q8N609 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAM1L1Q8N609 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAM1L1Q8N609 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms