Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 HEIH-201ENST00000623091 1652 ntBASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 MTMR9LP-203ENST00000426597 1545 ntBASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 DUX4L26-201ENST00000489078 1255 ntBASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 YBX1P2-201ENST00000489612 999 ntBASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ARHGEF39Q8N4T4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 MIR564-202ENST00000385049 94 ntBASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 COX11P1-201ENST00000489116 835 ntBASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 AL441883.1-201ENST00000566170 1045 ntBASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 AC011558.1-201ENST00000623459 338 ntBASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ARHGEF39Q8N4T4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ARHGEF39Q8N4T4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
ARHGEF39Q8N4T4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ARHGEF39Q8N4T4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.77■□□□□ 0.44
ARHGEF39Q8N4T4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.77■□□□□ 0.44
ARHGEF39Q8N4T4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ARHGEF39Q8N4T4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ARHGEF39Q8N4T4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.77■□□□□ 0.44
ARHGEF39Q8N4T4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.77■□□□□ 0.44
ARHGEF39Q8N4T4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ARHGEF39Q8N4T4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms