Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
UBR1Q8IWV7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.88
UBR1Q8IWV7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
UBR1Q8IWV7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
UBR1Q8IWV7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC26.83■■□□□ 1.88
UBR1Q8IWV7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
UBR1Q8IWV7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC26.82■■□□□ 1.88
UBR1Q8IWV7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
UBR1Q8IWV7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC26.82■■□□□ 1.88
UBR1Q8IWV7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
UBR1Q8IWV7 AC024563.2-201ENST00000603282 481 ntBASIC26.82■■□□□ 1.88
UBR1Q8IWV7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
UBR1Q8IWV7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
UBR1Q8IWV7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
UBR1Q8IWV7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC26.82■■□□□ 1.88
UBR1Q8IWV7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
UBR1Q8IWV7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
UBR1Q8IWV7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
UBR1Q8IWV7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
UBR1Q8IWV7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC26.82■■□□□ 1.88
UBR1Q8IWV7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
UBR1Q8IWV7 FAM220CP-201ENST00000395253 831 ntBASIC26.82■■□□□ 1.88
UBR1Q8IWV7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
UBR1Q8IWV7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC26.82■■□□□ 1.88
UBR1Q8IWV7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
UBR1Q8IWV7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
UBR1Q8IWV7 TEX21P-204ENST00000641479 1693 ntBASIC26.81■■□□□ 1.88
UBR1Q8IWV7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
UBR1Q8IWV7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
UBR1Q8IWV7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
UBR1Q8IWV7 TCF3P1-201ENST00000423021 1937 ntBASIC26.81■■□□□ 1.88
UBR1Q8IWV7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
UBR1Q8IWV7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
UBR1Q8IWV7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC26.81■■□□□ 1.88
UBR1Q8IWV7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC26.81■■□□□ 1.88
UBR1Q8IWV7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
UBR1Q8IWV7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
UBR1Q8IWV7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
UBR1Q8IWV7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
UBR1Q8IWV7 AF186996.4-201ENST00000467186 377 ntBASIC26.81■■□□□ 1.88
UBR1Q8IWV7 AC145285.3-201ENST00000564603 959 ntBASIC26.81■■□□□ 1.88
UBR1Q8IWV7 AC139887.3-201ENST00000568585 713 ntBASIC26.81■■□□□ 1.88
UBR1Q8IWV7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC26.81■■□□□ 1.88
UBR1Q8IWV7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
UBR1Q8IWV7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC26.81■■□□□ 1.88
UBR1Q8IWV7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
UBR1Q8IWV7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
UBR1Q8IWV7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC26.81■■□□□ 1.88
UBR1Q8IWV7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC26.81■■□□□ 1.88
UBR1Q8IWV7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
UBR1Q8IWV7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
UBR1Q8IWV7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
UBR1Q8IWV7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC26.8■■□□□ 1.88
UBR1Q8IWV7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC26.8■■□□□ 1.88
UBR1Q8IWV7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC26.8■■□□□ 1.88
UBR1Q8IWV7 MIR3180-4-201ENST00000582223 153 ntBASIC26.8■■□□□ 1.88
UBR1Q8IWV7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
UBR1Q8IWV7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
UBR1Q8IWV7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC26.8■■□□□ 1.88
UBR1Q8IWV7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC26.8■■□□□ 1.88
UBR1Q8IWV7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
UBR1Q8IWV7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC26.8■■□□□ 1.88
UBR1Q8IWV7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
UBR1Q8IWV7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
UBR1Q8IWV7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC26.79■■□□□ 1.88
UBR1Q8IWV7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC26.79■■□□□ 1.88
UBR1Q8IWV7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
UBR1Q8IWV7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
UBR1Q8IWV7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC26.79■■□□□ 1.88
UBR1Q8IWV7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
UBR1Q8IWV7 AL391422.3-201ENST00000603791 2761 ntBASIC26.79■■□□□ 1.88
UBR1Q8IWV7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
UBR1Q8IWV7 LINC00565-201ENST00000562710 2331 ntBASIC26.79■■□□□ 1.88
UBR1Q8IWV7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
UBR1Q8IWV7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC26.79■■□□□ 1.88
UBR1Q8IWV7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC26.79■■□□□ 1.88
UBR1Q8IWV7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC26.79■■□□□ 1.88
UBR1Q8IWV7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
UBR1Q8IWV7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC26.79■■□□□ 1.88
UBR1Q8IWV7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC26.79■■□□□ 1.88
UBR1Q8IWV7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC26.79■■□□□ 1.88
UBR1Q8IWV7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC26.78■■□□□ 1.88
UBR1Q8IWV7 AC099778.1-201ENST00000568593 1911 ntBASIC26.78■■□□□ 1.88
UBR1Q8IWV7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC26.78■■□□□ 1.88
UBR1Q8IWV7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
UBR1Q8IWV7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
UBR1Q8IWV7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC26.78■■□□□ 1.88
UBR1Q8IWV7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
UBR1Q8IWV7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC26.78■■□□□ 1.88
UBR1Q8IWV7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
UBR1Q8IWV7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC26.78■■□□□ 1.88
UBR1Q8IWV7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC26.78■■□□□ 1.88
UBR1Q8IWV7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
UBR1Q8IWV7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC26.78■■□□□ 1.88
UBR1Q8IWV7 AC096582.2-201ENST00000510860 516 ntBASIC26.78■■□□□ 1.88
UBR1Q8IWV7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC26.78■■□□□ 1.88
UBR1Q8IWV7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
UBR1Q8IWV7 AC009065.1-201ENST00000564055 1225 ntBASIC26.78■■□□□ 1.88
UBR1Q8IWV7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC26.78■■□□□ 1.88
UBR1Q8IWV7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms