Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC60Q8IWA6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC60Q8IWA6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC60Q8IWA6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC60Q8IWA6 AL049812.1-201ENST00000432563 2267 ntBASIC20.97■□□□□ 0.95
CCDC60Q8IWA6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC60Q8IWA6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC60Q8IWA6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCDC60Q8IWA6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC60Q8IWA6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC60Q8IWA6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CCDC60Q8IWA6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC60Q8IWA6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC60Q8IWA6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC60Q8IWA6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC60Q8IWA6 HYMAI.1-201ENST00000620949 238 ntBASIC20.96■□□□□ 0.95
CCDC60Q8IWA6 AL358472.4-201ENST00000633140 710 ntBASIC20.96■□□□□ 0.95
CCDC60Q8IWA6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC60Q8IWA6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC60Q8IWA6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC60Q8IWA6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
CCDC60Q8IWA6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC60Q8IWA6 SLC25A24-204ENST00000569674 2357 ntBASIC20.96■□□□□ 0.95
CCDC60Q8IWA6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC60Q8IWA6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CCDC60Q8IWA6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC60Q8IWA6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
CCDC60Q8IWA6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
CCDC60Q8IWA6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CCDC60Q8IWA6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.95■□□□□ 0.95
CCDC60Q8IWA6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC60Q8IWA6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC60Q8IWA6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CCDC60Q8IWA6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC60Q8IWA6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC60Q8IWA6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC60Q8IWA6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC60Q8IWA6 AC112907.2-201ENST00000448639 330 ntBASIC20.95■□□□□ 0.94
CCDC60Q8IWA6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC60Q8IWA6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC60Q8IWA6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC60Q8IWA6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC60Q8IWA6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC60Q8IWA6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC60Q8IWA6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
CCDC60Q8IWA6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
CCDC60Q8IWA6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC60Q8IWA6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC60Q8IWA6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC60Q8IWA6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC60Q8IWA6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC60Q8IWA6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC60Q8IWA6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC60Q8IWA6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC60Q8IWA6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC60Q8IWA6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC60Q8IWA6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC60Q8IWA6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CCDC60Q8IWA6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC60Q8IWA6 SEC1P-202ENST00000473944 940 ntBASIC20.94■□□□□ 0.94
CCDC60Q8IWA6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC60Q8IWA6 AC083849.1-201ENST00000615227 514 ntBASIC20.94■□□□□ 0.94
CCDC60Q8IWA6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC60Q8IWA6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
CCDC60Q8IWA6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC60Q8IWA6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC60Q8IWA6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCDC60Q8IWA6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC60Q8IWA6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC60Q8IWA6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC60Q8IWA6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC60Q8IWA6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC60Q8IWA6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC60Q8IWA6 FAM86EP-206ENST00000510506 987 ntBASIC20.93■□□□□ 0.94
CCDC60Q8IWA6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC60Q8IWA6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC60Q8IWA6 AL121956.5-201ENST00000625261 221 ntBASIC20.93■□□□□ 0.94
CCDC60Q8IWA6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC60Q8IWA6 AC068587.9-201ENST00000641814 219 ntBASIC20.93■□□□□ 0.94
CCDC60Q8IWA6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC60Q8IWA6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCDC60Q8IWA6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCDC60Q8IWA6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCDC60Q8IWA6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC60Q8IWA6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC60Q8IWA6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CCDC60Q8IWA6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC60Q8IWA6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC60Q8IWA6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC60Q8IWA6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC60Q8IWA6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC60Q8IWA6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC60Q8IWA6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC60Q8IWA6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
CCDC60Q8IWA6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC60Q8IWA6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC60Q8IWA6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC60Q8IWA6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC60Q8IWA6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC60Q8IWA6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms