Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 TSPY20P-201ENST00000450910 630 ntBASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 AC090164.3-201ENST00000610780 2143 ntBASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL3Q8IVW4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 FAM207BP-201ENST00000447172 505 ntBASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL3Q8IVW4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL3Q8IVW4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.36■□□□□ 0.69
CDKL3Q8IVW4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL3Q8IVW4 AL135905.2-201ENST00000584934 1404 ntBASIC19.36■□□□□ 0.69
CDKL3Q8IVW4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.36■□□□□ 0.69
CDKL3Q8IVW4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CDKL3Q8IVW4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL3Q8IVW4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.36■□□□□ 0.69
CDKL3Q8IVW4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.36■□□□□ 0.69
CDKL3Q8IVW4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.36■□□□□ 0.69
CDKL3Q8IVW4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.36■□□□□ 0.69
CDKL3Q8IVW4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL3Q8IVW4 AC068587.9-201ENST00000641814 219 ntBASIC19.36■□□□□ 0.69
CDKL3Q8IVW4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL3Q8IVW4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL3Q8IVW4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL3Q8IVW4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL3Q8IVW4 AC005082.1-201ENST00000413042 2259 ntBASIC19.36■□□□□ 0.69
CDKL3Q8IVW4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL3Q8IVW4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CDKL3Q8IVW4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.36■□□□□ 0.69
CDKL3Q8IVW4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.36■□□□□ 0.69
CDKL3Q8IVW4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL3Q8IVW4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 BCL2-203ENST00000589955 5011 ntBASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 KRT8P32-201ENST00000512863 1461 ntBASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 AC009113.1-201ENST00000570267 2443 ntBASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms