Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCXQ7RTU7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SCXQ7RTU7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCXQ7RTU7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCXQ7RTU7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCXQ7RTU7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SCXQ7RTU7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SCXQ7RTU7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCXQ7RTU7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SCXQ7RTU7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SCXQ7RTU7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCXQ7RTU7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCXQ7RTU7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCXQ7RTU7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SCXQ7RTU7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCXQ7RTU7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCXQ7RTU7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCXQ7RTU7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 AL390955.1-201ENST00000428694 934 ntBASIC12.47□□□□□ -0.41
SCXQ7RTU7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SCXQ7RTU7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCXQ7RTU7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCXQ7RTU7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCXQ7RTU7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 AC020907.5-201ENST00000624372 1936 ntBASIC12.47□□□□□ -0.41
SCXQ7RTU7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SCXQ7RTU7 AC018553.1-201ENST00000616682 1458 ntBASIC12.46□□□□□ -0.41
SCXQ7RTU7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SCXQ7RTU7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SCXQ7RTU7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SCXQ7RTU7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC12.46□□□□□ -0.41
SCXQ7RTU7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SCXQ7RTU7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SCXQ7RTU7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SCXQ7RTU7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SCXQ7RTU7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SCXQ7RTU7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
SCXQ7RTU7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SCXQ7RTU7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SCXQ7RTU7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC12.46□□□□□ -0.41
SCXQ7RTU7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SCXQ7RTU7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC12.46□□□□□ -0.41
SCXQ7RTU7 TMPOP1-202ENST00000424642 1267 ntBASIC12.46□□□□□ -0.41
SCXQ7RTU7 YBX1P10-201ENST00000444752 975 ntBASIC12.46□□□□□ -0.41
SCXQ7RTU7 RN7SL850P-201ENST00000579959 291 ntBASIC12.46□□□□□ -0.41
SCXQ7RTU7 AC145285.6-201ENST00000604632 637 ntBASIC12.46□□□□□ -0.41
SCXQ7RTU7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SCXQ7RTU7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SCXQ7RTU7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SCXQ7RTU7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SCXQ7RTU7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SCXQ7RTU7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC12.46□□□□□ -0.42
SCXQ7RTU7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC12.46□□□□□ -0.42
SCXQ7RTU7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC12.46□□□□□ -0.42
SCXQ7RTU7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.42
SCXQ7RTU7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SCXQ7RTU7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
SCXQ7RTU7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SCXQ7RTU7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SCXQ7RTU7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
SCXQ7RTU7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SCXQ7RTU7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC12.46□□□□□ -0.42
SCXQ7RTU7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SCXQ7RTU7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
SCXQ7RTU7 KRT8P9-201ENST00000558927 1449 ntBASIC12.45□□□□□ -0.42
SCXQ7RTU7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SCXQ7RTU7 AC106820.2-201ENST00000563775 3264 ntBASIC12.45□□□□□ -0.42
SCXQ7RTU7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SCXQ7RTU7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SCXQ7RTU7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SCXQ7RTU7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SCXQ7RTU7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
SCXQ7RTU7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SCXQ7RTU7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms