Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 REXO1L6P-202ENST00000619970 1078 ntBASIC23.8■■□□□ 1.4
SMIM5Q71RC9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
SMIM5Q71RC9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMIM5Q71RC9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMIM5Q71RC9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC23.8■■□□□ 1.4
SMIM5Q71RC9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SMIM5Q71RC9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMIM5Q71RC9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMIM5Q71RC9 NSUN5P1-202ENST00000421140 1535 ntBASIC23.79■■□□□ 1.4
SMIM5Q71RC9 NSUN5P2-203ENST00000457352 1529 ntBASIC23.79■■□□□ 1.4
SMIM5Q71RC9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMIM5Q71RC9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMIM5Q71RC9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMIM5Q71RC9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMIM5Q71RC9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
SMIM5Q71RC9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC23.79■■□□□ 1.4
SMIM5Q71RC9 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC23.79■■□□□ 1.4
SMIM5Q71RC9 POLD2P1-201ENST00000511220 997 ntBASIC23.79■■□□□ 1.4
SMIM5Q71RC9 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMIM5Q71RC9 ABR-217ENST00000572441 563 ntTSL 4 BASIC23.79■■□□□ 1.4
SMIM5Q71RC9 AL592071.1-201ENST00000611956 408 ntBASIC23.79■■□□□ 1.4
SMIM5Q71RC9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMIM5Q71RC9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMIM5Q71RC9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMIM5Q71RC9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC23.79■■□□□ 1.4
SMIM5Q71RC9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 AC104390.1-201ENST00000555663 520 ntBASIC23.78■■□□□ 1.4
SMIM5Q71RC9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.78■■□□□ 1.4
SMIM5Q71RC9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMIM5Q71RC9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMIM5Q71RC9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMIM5Q71RC9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
SMIM5Q71RC9 SAPCD2P3-201ENST00000455031 850 ntBASIC23.77■■□□□ 1.4
SMIM5Q71RC9 RN7SL606P-201ENST00000472779 293 ntBASIC23.77■■□□□ 1.4
SMIM5Q71RC9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC23.77■■□□□ 1.4
SMIM5Q71RC9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMIM5Q71RC9 AL049840.3-201ENST00000602669 611 ntBASIC23.77■■□□□ 1.4
SMIM5Q71RC9 IGHV3OR16-7-201ENST00000604106 360 ntBASIC23.77■■□□□ 1.4
SMIM5Q71RC9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMIM5Q71RC9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMIM5Q71RC9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMIM5Q71RC9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
SMIM5Q71RC9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMIM5Q71RC9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 PMS2P1-201ENST00000431037 1228 ntBASIC23.76■■□□□ 1.39
SMIM5Q71RC9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 AP001005.1-201ENST00000571755 1248 ntBASIC23.76■■□□□ 1.39
SMIM5Q71RC9 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 TCF3P1-201ENST00000423021 1937 ntBASIC23.76■■□□□ 1.39
SMIM5Q71RC9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
SMIM5Q71RC9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SMIM5Q71RC9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC23.75■■□□□ 1.39
SMIM5Q71RC9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
SMIM5Q71RC9 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC23.75■■□□□ 1.39
SMIM5Q71RC9 FAM197Y8-203ENST00000450145 560 ntBASIC23.75■■□□□ 1.39
SMIM5Q71RC9 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC23.75■■□□□ 1.39
SMIM5Q71RC9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms