Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 RPPH1-201ENST00000516869 333 ntBASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 FAM197Y4-202ENST00000622692 608 ntBASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 NBPF21P-201ENST00000425093 1451 ntBASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF111Q6ZNA4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 AC142381.4-202ENST00000563973 229 ntBASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 AC124016.1-201ENST00000609552 612 ntBASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF111Q6ZNA4 ABALON-201ENST00000629058 1903 ntBASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 YBX1P10-201ENST00000444752 975 ntBASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF111Q6ZNA4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms