Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC23.75■■□□□ 1.39
RC3H1Q5TC82 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC23.75■■□□□ 1.39
RC3H1Q5TC82 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.75■■□□□ 1.39
RC3H1Q5TC82 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.75■■□□□ 1.39
RC3H1Q5TC82 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RC3H1Q5TC82 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RC3H1Q5TC82 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RC3H1Q5TC82 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RC3H1Q5TC82 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC23.75■■□□□ 1.39
RC3H1Q5TC82 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RC3H1Q5TC82 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RC3H1Q5TC82 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC23.75■■□□□ 1.39
RC3H1Q5TC82 NSUN5P1-202ENST00000421140 1535 ntBASIC23.74■■□□□ 1.39
RC3H1Q5TC82 NSUN5P2-203ENST00000457352 1529 ntBASIC23.74■■□□□ 1.39
RC3H1Q5TC82 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
RC3H1Q5TC82 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.74■■□□□ 1.39
RC3H1Q5TC82 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
RC3H1Q5TC82 AC034236.2-201ENST00000606662 1610 ntBASIC23.74■■□□□ 1.39
RC3H1Q5TC82 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RC3H1Q5TC82 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.74■■□□□ 1.39
RC3H1Q5TC82 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RC3H1Q5TC82 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RC3H1Q5TC82 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RC3H1Q5TC82 LSM5-204ENST00000409909 740 ntTSL 2 BASIC23.74■■□□□ 1.39
RC3H1Q5TC82 CDV3-207ENST00000508481 661 ntTSL 3 BASIC23.74■■□□□ 1.39
RC3H1Q5TC82 AF238378.1-201ENST00000526806 358 ntBASIC23.74■■□□□ 1.39
RC3H1Q5TC82 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
RC3H1Q5TC82 AP005901.3-202ENST00000581653 237 ntBASIC23.74■■□□□ 1.39
RC3H1Q5TC82 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RC3H1Q5TC82 AC117500.6-201ENST00000624871 588 ntBASIC23.74■■□□□ 1.39
RC3H1Q5TC82 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RC3H1Q5TC82 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC23.74■■□□□ 1.39
RC3H1Q5TC82 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RC3H1Q5TC82 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RC3H1Q5TC82 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.74■■□□□ 1.39
RC3H1Q5TC82 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC23.74■■□□□ 1.39
RC3H1Q5TC82 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
RC3H1Q5TC82 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RC3H1Q5TC82 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RC3H1Q5TC82 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RC3H1Q5TC82 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RC3H1Q5TC82 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC23.73■■□□□ 1.39
RC3H1Q5TC82 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.73■■□□□ 1.39
RC3H1Q5TC82 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RC3H1Q5TC82 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
RC3H1Q5TC82 AL590627.1-203ENST00000421194 1026 ntBASIC23.73■■□□□ 1.39
RC3H1Q5TC82 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
RC3H1Q5TC82 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC23.73■■□□□ 1.39
RC3H1Q5TC82 IGHV3OR16-7-201ENST00000604106 360 ntBASIC23.73■■□□□ 1.39
RC3H1Q5TC82 AC120114.3-201ENST00000611923 658 ntBASIC23.73■■□□□ 1.39
RC3H1Q5TC82 NME4-212ENST00000621774 904 ntTSL 3 BASIC23.73■■□□□ 1.39
RC3H1Q5TC82 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RC3H1Q5TC82 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RC3H1Q5TC82 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.73■■□□□ 1.39
RC3H1Q5TC82 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RC3H1Q5TC82 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.73■■□□□ 1.39
RC3H1Q5TC82 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RC3H1Q5TC82 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
RC3H1Q5TC82 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RC3H1Q5TC82 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RC3H1Q5TC82 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.72■■□□□ 1.39
RC3H1Q5TC82 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RC3H1Q5TC82 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RC3H1Q5TC82 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
RC3H1Q5TC82 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RC3H1Q5TC82 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RC3H1Q5TC82 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RC3H1Q5TC82 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
RC3H1Q5TC82 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC23.72■■□□□ 1.39
RC3H1Q5TC82 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
RC3H1Q5TC82 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC23.72■■□□□ 1.39
RC3H1Q5TC82 AC064862.7-201ENST00000604520 867 ntBASIC23.72■■□□□ 1.39
RC3H1Q5TC82 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC23.72■■□□□ 1.39
RC3H1Q5TC82 KRT89P-201ENST00000620027 1478 ntBASIC23.72■■□□□ 1.39
RC3H1Q5TC82 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
RC3H1Q5TC82 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
RC3H1Q5TC82 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RC3H1Q5TC82 Z82202.1-201ENST00000623446 1880 ntBASIC23.72■■□□□ 1.39
RC3H1Q5TC82 AC006333.2-201ENST00000607957 2099 ntBASIC23.72■■□□□ 1.39
RC3H1Q5TC82 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
RC3H1Q5TC82 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.72■■□□□ 1.39
RC3H1Q5TC82 AC007375.3-201ENST00000600936 2314 ntBASIC23.71■■□□□ 1.39
RC3H1Q5TC82 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.71■■□□□ 1.39
RC3H1Q5TC82 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RC3H1Q5TC82 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RC3H1Q5TC82 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RC3H1Q5TC82 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RC3H1Q5TC82 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC23.71■■□□□ 1.39
RC3H1Q5TC82 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
RC3H1Q5TC82 PPOX-214ENST00000535223 664 ntTSL 3 BASIC23.71■■□□□ 1.39
RC3H1Q5TC82 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RC3H1Q5TC82 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.71■■□□□ 1.39
RC3H1Q5TC82 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23.71■■□□□ 1.39
RC3H1Q5TC82 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
RC3H1Q5TC82 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
RC3H1Q5TC82 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
RC3H1Q5TC82 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
RC3H1Q5TC82 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC23.7■■□□□ 1.39
RC3H1Q5TC82 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC23.7■■□□□ 1.39
RC3H1Q5TC82 AC092667.1-201ENST00000434301 2586 ntBASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms