Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.98■□□□□ 0.79
VARS2Q5ST30 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VARS2Q5ST30 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.97■□□□□ 0.79
VARS2Q5ST30 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VARS2Q5ST30 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VARS2Q5ST30 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.97■□□□□ 0.79
VARS2Q5ST30 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VARS2Q5ST30 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.97■□□□□ 0.79
VARS2Q5ST30 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VARS2Q5ST30 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VARS2Q5ST30 HBZP1-201ENST00000354915 429 ntBASIC19.97■□□□□ 0.79
VARS2Q5ST30 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VARS2Q5ST30 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.97■□□□□ 0.79
VARS2Q5ST30 SPDYE13P-201ENST00000445314 798 ntBASIC19.97■□□□□ 0.79
VARS2Q5ST30 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.97■□□□□ 0.79
VARS2Q5ST30 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.97■□□□□ 0.79
VARS2Q5ST30 SEC1P-202ENST00000473944 940 ntBASIC19.97■□□□□ 0.79
VARS2Q5ST30 AC092597.1-201ENST00000487352 616 ntBASIC19.97■□□□□ 0.79
VARS2Q5ST30 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
VARS2Q5ST30 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.97■□□□□ 0.79
VARS2Q5ST30 AC112497.1-201ENST00000624824 639 ntBASIC19.97■□□□□ 0.79
VARS2Q5ST30 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.97■□□□□ 0.79
VARS2Q5ST30 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VARS2Q5ST30 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.97■□□□□ 0.79
VARS2Q5ST30 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
VARS2Q5ST30 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
VARS2Q5ST30 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.96■□□□□ 0.79
VARS2Q5ST30 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.96■□□□□ 0.79
VARS2Q5ST30 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 FP475955.4-201ENST00000623131 1990 ntBASIC19.96■□□□□ 0.79
VARS2Q5ST30 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.96■□□□□ 0.79
VARS2Q5ST30 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.96■□□□□ 0.79
VARS2Q5ST30 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
VARS2Q5ST30 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.96■□□□□ 0.79
VARS2Q5ST30 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.96■□□□□ 0.79
VARS2Q5ST30 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.96■□□□□ 0.79
VARS2Q5ST30 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
VARS2Q5ST30 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.96■□□□□ 0.79
VARS2Q5ST30 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.96■□□□□ 0.79
VARS2Q5ST30 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.96■□□□□ 0.79
VARS2Q5ST30 AC093458.2-201ENST00000623150 629 ntBASIC19.96■□□□□ 0.79
VARS2Q5ST30 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.96■□□□□ 0.79
VARS2Q5ST30 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.96■□□□□ 0.79
VARS2Q5ST30 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
VARS2Q5ST30 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
VARS2Q5ST30 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARS2Q5ST30 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
VARS2Q5ST30 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VARS2Q5ST30 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VARS2Q5ST30 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VARS2Q5ST30 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VARS2Q5ST30 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VARS2Q5ST30 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.95■□□□□ 0.78
VARS2Q5ST30 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
VARS2Q5ST30 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.95■□□□□ 0.78
VARS2Q5ST30 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.95■□□□□ 0.78
VARS2Q5ST30 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.95■□□□□ 0.78
VARS2Q5ST30 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VARS2Q5ST30 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
VARS2Q5ST30 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VARS2Q5ST30 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VARS2Q5ST30 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VARS2Q5ST30 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VARS2Q5ST30 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VARS2Q5ST30 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.94■□□□□ 0.78
VARS2Q5ST30 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VARS2Q5ST30 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VARS2Q5ST30 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VARS2Q5ST30 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VARS2Q5ST30 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.94■□□□□ 0.78
VARS2Q5ST30 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VARS2Q5ST30 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.94■□□□□ 0.78
VARS2Q5ST30 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
VARS2Q5ST30 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VARS2Q5ST30 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms