Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 LINC01465-201ENST00000408887 1940 ntBASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.88■■□□□ 1.09
CCDC144BQ3MJ40 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 AP001271.2-201ENST00000624018 1556 ntBASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 AC009237.14-201ENST00000609975 1594 ntBASIC21.87■■□□□ 1.09
CCDC144BQ3MJ40 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC144BQ3MJ40 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC144BQ3MJ40 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC144BQ3MJ40 AL049812.1-201ENST00000432563 2267 ntBASIC21.86■■□□□ 1.09
CCDC144BQ3MJ40 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CCDC144BQ3MJ40 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC144BQ3MJ40 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.86■■□□□ 1.09
CCDC144BQ3MJ40 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC144BQ3MJ40 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC144BQ3MJ40 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC144BQ3MJ40 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC144BQ3MJ40 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.86■■□□□ 1.09
CCDC144BQ3MJ40 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.86■■□□□ 1.09
CCDC144BQ3MJ40 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC144BQ3MJ40 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.86■■□□□ 1.09
CCDC144BQ3MJ40 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.86■■□□□ 1.09
CCDC144BQ3MJ40 AL353719.1-201ENST00000566847 864 ntBASIC21.86■■□□□ 1.09
CCDC144BQ3MJ40 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC144BQ3MJ40 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC144BQ3MJ40 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.86■■□□□ 1.09
CCDC144BQ3MJ40 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CCDC144BQ3MJ40 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC144BQ3MJ40 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC144BQ3MJ40 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC144BQ3MJ40 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC144BQ3MJ40 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CCDC144BQ3MJ40 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC144BQ3MJ40 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.85■■□□□ 1.09
CCDC144BQ3MJ40 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CCDC144BQ3MJ40 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC144BQ3MJ40 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC144BQ3MJ40 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC144BQ3MJ40 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CCDC144BQ3MJ40 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.85■■□□□ 1.09
CCDC144BQ3MJ40 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC144BQ3MJ40 AC011558.1-201ENST00000623459 338 ntBASIC21.85■■□□□ 1.09
CCDC144BQ3MJ40 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.85■■□□□ 1.09
CCDC144BQ3MJ40 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CCDC144BQ3MJ40 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CCDC144BQ3MJ40 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC144BQ3MJ40 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC144BQ3MJ40 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC144BQ3MJ40 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC144BQ3MJ40 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CCDC144BQ3MJ40 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC144BQ3MJ40 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC144BQ3MJ40 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
CCDC144BQ3MJ40 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CCDC144BQ3MJ40 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC144BQ3MJ40 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC144BQ3MJ40 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC144BQ3MJ40 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC144BQ3MJ40 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.84■■□□□ 1.09
CCDC144BQ3MJ40 AC092647.4-201ENST00000457211 535 ntBASIC21.84■■□□□ 1.09
CCDC144BQ3MJ40 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC144BQ3MJ40 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.84■■□□□ 1.09
CCDC144BQ3MJ40 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC144BQ3MJ40 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.84■■□□□ 1.09
CCDC144BQ3MJ40 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CCDC144BQ3MJ40 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC144BQ3MJ40 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC144BQ3MJ40 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.84■■□□□ 1.09
CCDC144BQ3MJ40 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC144BQ3MJ40 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC144BQ3MJ40 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC144BQ3MJ40 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC144BQ3MJ40 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC144BQ3MJ40 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms