Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 PRKY-204ENST00000533551 1019 ntBASIC14.43□□□□□ -0.1
HIST1H1AQ02539 AC142086.2-201ENST00000569753 217 ntBASIC14.43□□□□□ -0.1
HIST1H1AQ02539 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST1H1AQ02539 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HIST1H1AQ02539 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 SDHAP1-207ENST00000440850 2000 ntBASIC14.41□□□□□ -0.1
HIST1H1AQ02539 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 UNC93B4-201ENST00000505679 747 ntBASIC14.41□□□□□ -0.1
HIST1H1AQ02539 KRT18P16-201ENST00000510337 1294 ntBASIC14.41□□□□□ -0.1
HIST1H1AQ02539 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms