Protein–RNA interactions for Protein: Q01959

SLC6A3, Sodium-dependent dopamine transporter, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A3Q01959 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A3Q01959 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC6A3Q01959 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC6A3Q01959 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A3Q01959 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A3Q01959 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A3Q01959 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC6A3Q01959 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC6A3Q01959 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A3Q01959 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A3Q01959 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A3Q01959 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC6A3Q01959 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A3Q01959 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A3Q01959 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A3Q01959 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
SLC6A3Q01959 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A3Q01959 GPAT2P1-201ENST00000444924 1672 ntBASIC19.73■□□□□ 0.75
SLC6A3Q01959 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.73■□□□□ 0.75
SLC6A3Q01959 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SLC6A3Q01959 AC007663.1-201ENST00000438948 1240 ntBASIC19.73■□□□□ 0.75
SLC6A3Q01959 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.73■□□□□ 0.75
SLC6A3Q01959 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC6A3Q01959 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC6A3Q01959 AP003041.3-201ENST00000527151 707 ntBASIC19.73■□□□□ 0.75
SLC6A3Q01959 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC6A3Q01959 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC6A3Q01959 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC6A3Q01959 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SLC6A3Q01959 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A3Q01959 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A3Q01959 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
SLC6A3Q01959 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC6A3Q01959 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A3Q01959 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A3Q01959 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC6A3Q01959 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A3Q01959 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SLC6A3Q01959 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A3Q01959 MTMR9LP-203ENST00000426597 1545 ntBASIC19.72■□□□□ 0.75
SLC6A3Q01959 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A3Q01959 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.72■□□□□ 0.75
SLC6A3Q01959 AL109659.2-201ENST00000606809 1674 ntBASIC19.72■□□□□ 0.75
SLC6A3Q01959 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SLC6A3Q01959 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC6A3Q01959 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SLC6A3Q01959 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A3Q01959 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A3Q01959 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A3Q01959 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC6A3Q01959 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.72■□□□□ 0.75
SLC6A3Q01959 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.72■□□□□ 0.75
SLC6A3Q01959 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.72■□□□□ 0.75
SLC6A3Q01959 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A3Q01959 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A3Q01959 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A3Q01959 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
SLC6A3Q01959 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A3Q01959 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A3Q01959 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC6A3Q01959 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC6A3Q01959 Z98044.1-201ENST00000632503 1764 ntBASIC19.72■□□□□ 0.75
SLC6A3Q01959 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A3Q01959 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A3Q01959 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC6A3Q01959 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A3Q01959 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SLC6A3Q01959 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A3Q01959 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC6A3Q01959 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC6A3Q01959 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A3Q01959 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC6A3Q01959 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A3Q01959 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.71■□□□□ 0.75
SLC6A3Q01959 INGX-201ENST00000359239 846 ntBASIC19.71■□□□□ 0.75
SLC6A3Q01959 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC6A3Q01959 AC087499.1-201ENST00000418141 1075 ntBASIC19.71■□□□□ 0.75
SLC6A3Q01959 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC6A3Q01959 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A3Q01959 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A3Q01959 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A3Q01959 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC6A3Q01959 MIR4674-201ENST00000582457 87 ntBASIC19.71■□□□□ 0.75
SLC6A3Q01959 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A3Q01959 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A3Q01959 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC6A3Q01959 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SLC6A3Q01959 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A3Q01959 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.71■□□□□ 0.75
SLC6A3Q01959 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A3Q01959 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A3Q01959 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A3Q01959 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC6A3Q01959 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SLC6A3Q01959 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC6A3Q01959 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A3Q01959 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
SLC6A3Q01959 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SLC6A3Q01959 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A3Q01959 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms