Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3AP84243 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3AP84243 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3AP84243 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3AP84243 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3AP84243 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
H3F3AP84243 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.86■□□□□ 0.29
H3F3AP84243 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3AP84243 AC087499.1-201ENST00000418141 1075 ntBASIC16.86■□□□□ 0.29
H3F3AP84243 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.86■□□□□ 0.29
H3F3AP84243 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.86■□□□□ 0.29
H3F3AP84243 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3AP84243 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.86■□□□□ 0.29
H3F3AP84243 AC073912.3-201ENST00000624414 853 ntBASIC16.86■□□□□ 0.29
H3F3AP84243 AC083906.6-201ENST00000641366 219 ntBASIC16.86■□□□□ 0.29
H3F3AP84243 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3AP84243 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3AP84243 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
H3F3AP84243 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
H3F3AP84243 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.86■□□□□ 0.29
H3F3AP84243 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3AP84243 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3AP84243 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3AP84243 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.86■□□□□ 0.29
H3F3AP84243 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.86■□□□□ 0.29
H3F3AP84243 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3AP84243 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3AP84243 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3AP84243 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
H3F3AP84243 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
H3F3AP84243 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H3F3AP84243 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
H3F3AP84243 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H3F3AP84243 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H3F3AP84243 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H3F3AP84243 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H3F3AP84243 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
H3F3AP84243 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H3F3AP84243 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H3F3AP84243 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
H3F3AP84243 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.85■□□□□ 0.29
H3F3AP84243 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.85■□□□□ 0.29
H3F3AP84243 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
H3F3AP84243 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.85■□□□□ 0.29
H3F3AP84243 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.85■□□□□ 0.29
H3F3AP84243 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.85■□□□□ 0.29
H3F3AP84243 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.85■□□□□ 0.29
H3F3AP84243 AC116562.4-202ENST00000641738 218 ntBASIC16.85■□□□□ 0.29
H3F3AP84243 AC068587.9-201ENST00000641814 219 ntBASIC16.85■□□□□ 0.29
H3F3AP84243 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
H3F3AP84243 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
H3F3AP84243 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
H3F3AP84243 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H3F3AP84243 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H3F3AP84243 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H3F3AP84243 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
H3F3AP84243 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.85■□□□□ 0.29
H3F3AP84243 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H3F3AP84243 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
H3F3AP84243 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H3F3AP84243 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
H3F3AP84243 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.85■□□□□ 0.29
H3F3AP84243 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
H3F3AP84243 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H3F3AP84243 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
H3F3AP84243 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
H3F3AP84243 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
H3F3AP84243 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
H3F3AP84243 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
H3F3AP84243 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.84■□□□□ 0.29
H3F3AP84243 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H3F3AP84243 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.84■□□□□ 0.29
H3F3AP84243 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.84■□□□□ 0.29
H3F3AP84243 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.84■□□□□ 0.29
H3F3AP84243 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.84■□□□□ 0.29
H3F3AP84243 AC007663.1-201ENST00000438948 1240 ntBASIC16.84■□□□□ 0.29
H3F3AP84243 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.84■□□□□ 0.29
H3F3AP84243 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
H3F3AP84243 AC010653.2-201ENST00000623505 997 ntBASIC16.84■□□□□ 0.29
H3F3AP84243 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
H3F3AP84243 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
H3F3AP84243 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
H3F3AP84243 HEIH-201ENST00000623091 1652 ntBASIC16.84■□□□□ 0.29
H3F3AP84243 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
H3F3AP84243 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
H3F3AP84243 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
H3F3AP84243 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H3F3AP84243 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H3F3AP84243 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
H3F3AP84243 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
H3F3AP84243 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
H3F3AP84243 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
H3F3AP84243 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
H3F3AP84243 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
H3F3AP84243 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
H3F3AP84243 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.83■□□□□ 0.28
H3F3AP84243 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
H3F3AP84243 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
H3F3AP84243 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
H3F3AP84243 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms