Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SEC61A1P61619 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SEC61A1P61619 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SEC61A1P61619 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.5■□□□□ 0.23
SEC61A1P61619 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SEC61A1P61619 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SEC61A1P61619 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SEC61A1P61619 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SEC61A1P61619 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.5■□□□□ 0.23
SEC61A1P61619 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SEC61A1P61619 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.5■□□□□ 0.23
SEC61A1P61619 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.5■□□□□ 0.23
SEC61A1P61619 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.5■□□□□ 0.23
SEC61A1P61619 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.5■□□□□ 0.23
SEC61A1P61619 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.5■□□□□ 0.23
SEC61A1P61619 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SEC61A1P61619 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.5■□□□□ 0.23
SEC61A1P61619 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SEC61A1P61619 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SEC61A1P61619 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SEC61A1P61619 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SEC61A1P61619 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SEC61A1P61619 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.5■□□□□ 0.23
SEC61A1P61619 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SEC61A1P61619 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SEC61A1P61619 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SEC61A1P61619 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.49■□□□□ 0.23
SEC61A1P61619 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
SEC61A1P61619 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.49■□□□□ 0.23
SEC61A1P61619 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SEC61A1P61619 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SEC61A1P61619 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SEC61A1P61619 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SEC61A1P61619 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SEC61A1P61619 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
SEC61A1P61619 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SEC61A1P61619 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SEC61A1P61619 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SEC61A1P61619 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.49■□□□□ 0.23
SEC61A1P61619 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SEC61A1P61619 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.49■□□□□ 0.23
SEC61A1P61619 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SEC61A1P61619 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SEC61A1P61619 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
SEC61A1P61619 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.49■□□□□ 0.23
SEC61A1P61619 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SEC61A1P61619 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.49■□□□□ 0.23
SEC61A1P61619 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SEC61A1P61619 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SEC61A1P61619 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.49■□□□□ 0.23
SEC61A1P61619 AP001271.2-201ENST00000624018 1556 ntBASIC16.49■□□□□ 0.23
SEC61A1P61619 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.49■□□□□ 0.23
SEC61A1P61619 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SEC61A1P61619 AC068880.1-201ENST00000507289 2297 ntBASIC16.49■□□□□ 0.23
SEC61A1P61619 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SEC61A1P61619 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SEC61A1P61619 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SEC61A1P61619 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SEC61A1P61619 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.48■□□□□ 0.23
SEC61A1P61619 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SEC61A1P61619 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SEC61A1P61619 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SEC61A1P61619 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.48■□□□□ 0.23
SEC61A1P61619 AC090164.3-201ENST00000610780 2143 ntBASIC16.48■□□□□ 0.23
SEC61A1P61619 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SEC61A1P61619 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SEC61A1P61619 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SEC61A1P61619 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.48■□□□□ 0.23
SEC61A1P61619 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SEC61A1P61619 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.48■□□□□ 0.23
SEC61A1P61619 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.48■□□□□ 0.23
SEC61A1P61619 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.48■□□□□ 0.23
SEC61A1P61619 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.48■□□□□ 0.23
SEC61A1P61619 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.48■□□□□ 0.23
SEC61A1P61619 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SEC61A1P61619 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SEC61A1P61619 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SEC61A1P61619 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SEC61A1P61619 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SEC61A1P61619 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SEC61A1P61619 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
SEC61A1P61619 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SEC61A1P61619 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SEC61A1P61619 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SEC61A1P61619 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SEC61A1P61619 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SEC61A1P61619 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SEC61A1P61619 NBPF21P-201ENST00000425093 1451 ntBASIC16.48■□□□□ 0.23
SEC61A1P61619 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SEC61A1P61619 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SEC61A1P61619 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SEC61A1P61619 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SEC61A1P61619 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SEC61A1P61619 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
SEC61A1P61619 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SEC61A1P61619 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.47■□□□□ 0.23
SEC61A1P61619 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SEC61A1P61619 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.47■□□□□ 0.23
SEC61A1P61619 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SEC61A1P61619 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms