Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
WNT3AP56704 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
WNT3AP56704 HEIH-201ENST00000623091 1652 ntBASIC19.06■□□□□ 0.64
WNT3AP56704 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
WNT3AP56704 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
WNT3AP56704 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
WNT3AP56704 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.06■□□□□ 0.64
WNT3AP56704 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.06■□□□□ 0.64
WNT3AP56704 AL355075.4-201ENST00000554988 638 ntBASIC19.06■□□□□ 0.64
WNT3AP56704 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
WNT3AP56704 AP000525.1-201ENST00000608286 694 ntBASIC19.06■□□□□ 0.64
WNT3AP56704 AC068587.9-201ENST00000641814 219 ntBASIC19.06■□□□□ 0.64
WNT3AP56704 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
WNT3AP56704 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
WNT3AP56704 AL138781.2-201ENST00000617896 1843 ntBASIC19.06■□□□□ 0.64
WNT3AP56704 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
WNT3AP56704 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
WNT3AP56704 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
WNT3AP56704 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
WNT3AP56704 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
WNT3AP56704 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
WNT3AP56704 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
WNT3AP56704 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
WNT3AP56704 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
WNT3AP56704 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.05■□□□□ 0.64
WNT3AP56704 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
WNT3AP56704 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
WNT3AP56704 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.05■□□□□ 0.64
WNT3AP56704 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
WNT3AP56704 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
WNT3AP56704 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
WNT3AP56704 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
WNT3AP56704 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
WNT3AP56704 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
WNT3AP56704 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
WNT3AP56704 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
WNT3AP56704 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
WNT3AP56704 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
WNT3AP56704 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
WNT3AP56704 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.05■□□□□ 0.64
WNT3AP56704 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.05■□□□□ 0.64
WNT3AP56704 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
WNT3AP56704 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
WNT3AP56704 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.05■□□□□ 0.64
WNT3AP56704 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
WNT3AP56704 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
WNT3AP56704 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.05■□□□□ 0.64
WNT3AP56704 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
WNT3AP56704 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.05■□□□□ 0.64
WNT3AP56704 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
WNT3AP56704 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
WNT3AP56704 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
WNT3AP56704 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
WNT3AP56704 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
WNT3AP56704 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
WNT3AP56704 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
WNT3AP56704 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.04■□□□□ 0.64
WNT3AP56704 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
WNT3AP56704 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
WNT3AP56704 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
WNT3AP56704 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
WNT3AP56704 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
WNT3AP56704 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
WNT3AP56704 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.04■□□□□ 0.64
WNT3AP56704 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
WNT3AP56704 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
WNT3AP56704 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
WNT3AP56704 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
WNT3AP56704 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
WNT3AP56704 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
WNT3AP56704 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.04■□□□□ 0.64
WNT3AP56704 TSPY15P-201ENST00000457163 923 ntBASIC19.04■□□□□ 0.64
WNT3AP56704 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.04■□□□□ 0.64
WNT3AP56704 AC008622.2-201ENST00000617006 1229 ntBASIC19.04■□□□□ 0.64
WNT3AP56704 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
WNT3AP56704 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
WNT3AP56704 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.04■□□□□ 0.64
WNT3AP56704 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
WNT3AP56704 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
WNT3AP56704 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.03■□□□□ 0.64
WNT3AP56704 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.03■□□□□ 0.64
WNT3AP56704 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.03■□□□□ 0.64
WNT3AP56704 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.03■□□□□ 0.64
WNT3AP56704 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
WNT3AP56704 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.03■□□□□ 0.64
WNT3AP56704 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
WNT3AP56704 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.03■□□□□ 0.64
WNT3AP56704 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
WNT3AP56704 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
WNT3AP56704 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.03■□□□□ 0.64
WNT3AP56704 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
WNT3AP56704 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.03■□□□□ 0.64
WNT3AP56704 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
WNT3AP56704 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.03■□□□□ 0.64
WNT3AP56704 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
WNT3AP56704 AL596275.1-201ENST00000423464 877 ntBASIC19.03■□□□□ 0.64
WNT3AP56704 AL390955.1-201ENST00000428694 934 ntBASIC19.03■□□□□ 0.64
WNT3AP56704 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.03■□□□□ 0.64
WNT3AP56704 FITM1-202ENST00000559294 800 ntBASIC19.03■□□□□ 0.64
WNT3AP56704 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms