Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.47■□□□□ 0.71
PMS2P54278 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PMS2P54278 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PMS2P54278 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PMS2P54278 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PMS2P54278 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PMS2P54278 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.47■□□□□ 0.71
PMS2P54278 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.47■□□□□ 0.71
PMS2P54278 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.47■□□□□ 0.71
PMS2P54278 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PMS2P54278 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.47■□□□□ 0.71
PMS2P54278 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.47■□□□□ 0.71
PMS2P54278 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.47■□□□□ 0.71
PMS2P54278 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PMS2P54278 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PMS2P54278 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PMS2P54278 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.47■□□□□ 0.71
PMS2P54278 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.47■□□□□ 0.71
PMS2P54278 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PMS2P54278 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PMS2P54278 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PMS2P54278 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PMS2P54278 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PMS2P54278 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PMS2P54278 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PMS2P54278 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.46■□□□□ 0.71
PMS2P54278 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.46■□□□□ 0.71
PMS2P54278 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.46■□□□□ 0.71
PMS2P54278 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PMS2P54278 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PMS2P54278 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.46■□□□□ 0.71
PMS2P54278 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PMS2P54278 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PMS2P54278 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PMS2P54278 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PMS2P54278 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PMS2P54278 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PMS2P54278 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PMS2P54278 AC126763.1-201ENST00000552015 2118 ntBASIC19.46■□□□□ 0.71
PMS2P54278 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
PMS2P54278 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PMS2P54278 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PMS2P54278 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.46■□□□□ 0.71
PMS2P54278 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PMS2P54278 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PMS2P54278 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.45■□□□□ 0.7
PMS2P54278 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PMS2P54278 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.45■□□□□ 0.7
PMS2P54278 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PMS2P54278 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
PMS2P54278 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.45■□□□□ 0.7
PMS2P54278 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.45■□□□□ 0.7
PMS2P54278 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PMS2P54278 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PMS2P54278 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PMS2P54278 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PMS2P54278 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PMS2P54278 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PMS2P54278 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.45■□□□□ 0.7
PMS2P54278 YBX1P10-201ENST00000444752 975 ntBASIC19.45■□□□□ 0.7
PMS2P54278 AC128676.1-201ENST00000454392 318 ntBASIC19.45■□□□□ 0.7
PMS2P54278 AC005829.2-201ENST00000571422 1056 ntBASIC19.45■□□□□ 0.7
PMS2P54278 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.45■□□□□ 0.7
PMS2P54278 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PMS2P54278 AC124283.5-201ENST00000624661 1809 ntBASIC19.45■□□□□ 0.7
PMS2P54278 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PMS2P54278 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PMS2P54278 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PMS2P54278 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.45■□□□□ 0.7
PMS2P54278 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.45■□□□□ 0.7
PMS2P54278 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PMS2P54278 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PMS2P54278 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PMS2P54278 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.44■□□□□ 0.7
PMS2P54278 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PMS2P54278 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PMS2P54278 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PMS2P54278 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PMS2P54278 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
PMS2P54278 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.44■□□□□ 0.7
PMS2P54278 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.44■□□□□ 0.7
PMS2P54278 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.44■□□□□ 0.7
PMS2P54278 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PMS2P54278 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
PMS2P54278 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PMS2P54278 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.44■□□□□ 0.7
PMS2P54278 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.44■□□□□ 0.7
PMS2P54278 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PMS2P54278 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.44■□□□□ 0.7
PMS2P54278 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.44■□□□□ 0.7
PMS2P54278 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PMS2P54278 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PMS2P54278 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PMS2P54278 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.44■□□□□ 0.7
PMS2P54278 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PMS2P54278 AP006587.1-201ENST00000534129 1502 ntBASIC19.44■□□□□ 0.7
PMS2P54278 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PMS2P54278 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PMS2P54278 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PMS2P54278 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms