Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.03■□□□□ 0.64
LIMK2P53671 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LIMK2P53671 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LIMK2P53671 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LIMK2P53671 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LIMK2P53671 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LIMK2P53671 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LIMK2P53671 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.03■□□□□ 0.64
LIMK2P53671 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LIMK2P53671 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LIMK2P53671 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LIMK2P53671 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LIMK2P53671 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LIMK2P53671 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
LIMK2P53671 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LIMK2P53671 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LIMK2P53671 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.02■□□□□ 0.64
LIMK2P53671 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LIMK2P53671 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
LIMK2P53671 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.02■□□□□ 0.64
LIMK2P53671 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
LIMK2P53671 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LIMK2P53671 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
LIMK2P53671 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LIMK2P53671 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.02■□□□□ 0.64
LIMK2P53671 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.02■□□□□ 0.64
LIMK2P53671 MIR1224-201ENST00000408193 85 ntBASIC19.02■□□□□ 0.64
LIMK2P53671 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.02■□□□□ 0.64
LIMK2P53671 KSR1P1-201ENST00000446298 240 ntBASIC19.02■□□□□ 0.64
LIMK2P53671 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LIMK2P53671 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.02■□□□□ 0.64
LIMK2P53671 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.02■□□□□ 0.64
LIMK2P53671 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LIMK2P53671 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.02■□□□□ 0.64
LIMK2P53671 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.02■□□□□ 0.64
LIMK2P53671 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.02■□□□□ 0.64
LIMK2P53671 HLA-A-209ENST00000638375 975 ntBASIC19.02■□□□□ 0.64
LIMK2P53671 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LIMK2P53671 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
LIMK2P53671 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LIMK2P53671 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LIMK2P53671 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LIMK2P53671 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LIMK2P53671 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.02■□□□□ 0.63
LIMK2P53671 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LIMK2P53671 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK2P53671 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK2P53671 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK2P53671 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK2P53671 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK2P53671 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK2P53671 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
LIMK2P53671 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
LIMK2P53671 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
LIMK2P53671 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK2P53671 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK2P53671 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK2P53671 NIFKP9-201ENST00000419265 221 ntBASIC19.01■□□□□ 0.63
LIMK2P53671 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.01■□□□□ 0.63
LIMK2P53671 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.01■□□□□ 0.63
LIMK2P53671 REXO1L10P-201ENST00000615707 1290 ntBASIC19.01■□□□□ 0.63
LIMK2P53671 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.01■□□□□ 0.63
LIMK2P53671 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.01■□□□□ 0.63
LIMK2P53671 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.01■□□□□ 0.63
LIMK2P53671 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK2P53671 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK2P53671 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK2P53671 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.01■□□□□ 0.63
LIMK2P53671 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.01■□□□□ 0.63
LIMK2P53671 AC005082.1-201ENST00000413042 2259 ntBASIC19■□□□□ 0.63
LIMK2P53671 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LIMK2P53671 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19■□□□□ 0.63
LIMK2P53671 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LIMK2P53671 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LIMK2P53671 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LIMK2P53671 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LIMK2P53671 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LIMK2P53671 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LIMK2P53671 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LIMK2P53671 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LIMK2P53671 RBM17P1-201ENST00000453646 1190 ntBASIC19■□□□□ 0.63
LIMK2P53671 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LIMK2P53671 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19■□□□□ 0.63
LIMK2P53671 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LIMK2P53671 AL160286.2-201ENST00000567150 934 ntBASIC19■□□□□ 0.63
LIMK2P53671 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19■□□□□ 0.63
LIMK2P53671 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19■□□□□ 0.63
LIMK2P53671 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
LIMK2P53671 GAS2L1P1-201ENST00000420145 1480 ntBASIC19■□□□□ 0.63
LIMK2P53671 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
LIMK2P53671 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19■□□□□ 0.63
LIMK2P53671 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19■□□□□ 0.63
LIMK2P53671 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LIMK2P53671 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
LIMK2P53671 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19■□□□□ 0.63
LIMK2P53671 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK2P53671 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK2P53671 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK2P53671 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK2P53671 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms