Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.78■□□□□ 0.92
ACLYP53396 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.78■□□□□ 0.92
ACLYP53396 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ACLYP53396 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ACLYP53396 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.78■□□□□ 0.92
ACLYP53396 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ACLYP53396 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
ACLYP53396 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ACLYP53396 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ACLYP53396 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.78■□□□□ 0.92
ACLYP53396 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.78■□□□□ 0.92
ACLYP53396 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.78■□□□□ 0.92
ACLYP53396 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.78■□□□□ 0.92
ACLYP53396 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
ACLYP53396 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.78■□□□□ 0.92
ACLYP53396 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ACLYP53396 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ACLYP53396 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ACLYP53396 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ACLYP53396 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.78■□□□□ 0.92
ACLYP53396 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ACLYP53396 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.77■□□□□ 0.92
ACLYP53396 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ACLYP53396 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ACLYP53396 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ACLYP53396 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.77■□□□□ 0.92
ACLYP53396 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.77■□□□□ 0.92
ACLYP53396 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.77■□□□□ 0.92
ACLYP53396 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ACLYP53396 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.77■□□□□ 0.92
ACLYP53396 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.77■□□□□ 0.92
ACLYP53396 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.77■□□□□ 0.92
ACLYP53396 Z69720.1-201ENST00000601483 472 ntBASIC20.77■□□□□ 0.92
ACLYP53396 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.77■□□□□ 0.92
ACLYP53396 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ACLYP53396 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
ACLYP53396 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
ACLYP53396 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ACLYP53396 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.77■□□□□ 0.92
ACLYP53396 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ACLYP53396 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ACLYP53396 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ACLYP53396 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
ACLYP53396 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ACLYP53396 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ACLYP53396 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACLYP53396 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACLYP53396 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACLYP53396 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.76■□□□□ 0.91
ACLYP53396 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.76■□□□□ 0.91
ACLYP53396 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACLYP53396 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.76■□□□□ 0.91
ACLYP53396 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.76■□□□□ 0.91
ACLYP53396 GPR32P1-201ENST00000601788 811 ntBASIC20.76■□□□□ 0.91
ACLYP53396 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ACLYP53396 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACLYP53396 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ACLYP53396 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACLYP53396 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ACLYP53396 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACLYP53396 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACLYP53396 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACLYP53396 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ACLYP53396 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACLYP53396 HLA-A-201ENST00000376802 1334 ntBASIC20.76■□□□□ 0.91
ACLYP53396 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACLYP53396 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.75■□□□□ 0.91
ACLYP53396 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
ACLYP53396 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACLYP53396 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACLYP53396 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ACLYP53396 MIR564-202ENST00000385049 94 ntBASIC20.75■□□□□ 0.91
ACLYP53396 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.75■□□□□ 0.91
ACLYP53396 IGHV3-47-201ENST00000425060 335 ntBASIC20.75■□□□□ 0.91
ACLYP53396 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.75■□□□□ 0.91
ACLYP53396 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACLYP53396 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACLYP53396 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ACLYP53396 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ACLYP53396 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACLYP53396 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACLYP53396 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
ACLYP53396 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
ACLYP53396 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.75■□□□□ 0.91
ACLYP53396 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.75■□□□□ 0.91
ACLYP53396 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ACLYP53396 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ACLYP53396 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.74■□□□□ 0.91
ACLYP53396 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
ACLYP53396 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.74■□□□□ 0.91
ACLYP53396 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ACLYP53396 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.74■□□□□ 0.91
ACLYP53396 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.74■□□□□ 0.91
ACLYP53396 AKR1C7P-201ENST00000305623 895 ntBASIC20.74■□□□□ 0.91
ACLYP53396 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ACLYP53396 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.74■□□□□ 0.91
ACLYP53396 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ACLYP53396 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.74■□□□□ 0.91
ACLYP53396 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
ACLYP53396 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms