Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AP006294.2-201ENST00000641667 209 ntBASIC19.62■□□□□ 0.73
MMP13P45452 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.62■□□□□ 0.73
MMP13P45452 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
MMP13P45452 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP13P45452 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
MMP13P45452 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MMP13P45452 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.62■□□□□ 0.73
MMP13P45452 AC068880.1-201ENST00000507289 2297 ntBASIC19.62■□□□□ 0.73
MMP13P45452 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
MMP13P45452 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP13P45452 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP13P45452 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP13P45452 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.61■□□□□ 0.73
MMP13P45452 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.61■□□□□ 0.73
MMP13P45452 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP13P45452 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP13P45452 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MMP13P45452 FP475955.4-201ENST00000623131 1990 ntBASIC19.61■□□□□ 0.73
MMP13P45452 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.61■□□□□ 0.73
MMP13P45452 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP13P45452 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MMP13P45452 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP13P45452 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MMP13P45452 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MMP13P45452 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP13P45452 AC004980.1-204ENST00000429707 299 ntBASIC19.61■□□□□ 0.73
MMP13P45452 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.61■□□□□ 0.73
MMP13P45452 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MMP13P45452 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.61■□□□□ 0.73
MMP13P45452 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.61■□□□□ 0.73
MMP13P45452 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.61■□□□□ 0.73
MMP13P45452 AP001412.1-201ENST00000608405 714 ntBASIC19.61■□□□□ 0.73
MMP13P45452 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP13P45452 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.61■□□□□ 0.73
MMP13P45452 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.61■□□□□ 0.73
MMP13P45452 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
MMP13P45452 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP13P45452 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MMP13P45452 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.6■□□□□ 0.73
MMP13P45452 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MMP13P45452 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
MMP13P45452 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
MMP13P45452 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.6■□□□□ 0.73
MMP13P45452 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MMP13P45452 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
MMP13P45452 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MMP13P45452 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
MMP13P45452 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MMP13P45452 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
MMP13P45452 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MMP13P45452 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MMP13P45452 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MMP13P45452 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.6■□□□□ 0.73
MMP13P45452 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.6■□□□□ 0.73
MMP13P45452 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MMP13P45452 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.6■□□□□ 0.73
MMP13P45452 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.6■□□□□ 0.73
MMP13P45452 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.6■□□□□ 0.73
MMP13P45452 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.6■□□□□ 0.73
MMP13P45452 Z99916.2-201ENST00000604037 246 ntBASIC19.6■□□□□ 0.73
MMP13P45452 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.6■□□□□ 0.73
MMP13P45452 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
MMP13P45452 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MMP13P45452 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.6■□□□□ 0.73
MMP13P45452 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
MMP13P45452 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MMP13P45452 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
MMP13P45452 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
MMP13P45452 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.6■□□□□ 0.73
MMP13P45452 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MMP13P45452 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
MMP13P45452 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.6■□□□□ 0.73
MMP13P45452 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP13P45452 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP13P45452 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.59■□□□□ 0.73
MMP13P45452 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP13P45452 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP13P45452 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP13P45452 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MMP13P45452 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP13P45452 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.59■□□□□ 0.73
MMP13P45452 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP13P45452 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP13P45452 MIR718-201ENST00000390190 70 ntBASIC19.59■□□□□ 0.73
MMP13P45452 FAM197Y1-201ENST00000421178 764 ntBASIC19.59■□□□□ 0.73
MMP13P45452 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MMP13P45452 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
MMP13P45452 CD177P1-201ENST00000606252 935 ntBASIC19.59■□□□□ 0.73
MMP13P45452 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
MMP13P45452 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.59■□□□□ 0.73
MMP13P45452 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.59■□□□□ 0.73
MMP13P45452 AL049637.2-201ENST00000641778 930 ntBASIC19.59■□□□□ 0.73
MMP13P45452 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP13P45452 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP13P45452 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.59■□□□□ 0.73
MMP13P45452 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP13P45452 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.59■□□□□ 0.73
MMP13P45452 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP13P45452 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
MMP13P45452 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms