Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MDH1P40925 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
MDH1P40925 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MDH1P40925 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.97■□□□□ 0.63
MDH1P40925 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.96■□□□□ 0.63
MDH1P40925 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MDH1P40925 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.96■□□□□ 0.63
MDH1P40925 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.96■□□□□ 0.63
MDH1P40925 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.96■□□□□ 0.63
MDH1P40925 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MDH1P40925 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MDH1P40925 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
MDH1P40925 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
MDH1P40925 TERF1P2-201ENST00000583350 1212 ntBASIC18.96■□□□□ 0.63
MDH1P40925 AC106739.1-201ENST00000617035 715 ntBASIC18.96■□□□□ 0.63
MDH1P40925 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.96■□□□□ 0.63
MDH1P40925 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
MDH1P40925 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MDH1P40925 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MDH1P40925 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
MDH1P40925 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.96■□□□□ 0.63
MDH1P40925 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
MDH1P40925 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MDH1P40925 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MDH1P40925 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MDH1P40925 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.95■□□□□ 0.62
MDH1P40925 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MDH1P40925 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.95■□□□□ 0.62
MDH1P40925 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MDH1P40925 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MDH1P40925 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
MDH1P40925 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MDH1P40925 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MDH1P40925 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MDH1P40925 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
MDH1P40925 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.95■□□□□ 0.62
MDH1P40925 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MDH1P40925 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MDH1P40925 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.95■□□□□ 0.62
MDH1P40925 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.95■□□□□ 0.62
MDH1P40925 UBE2DNL-204ENST00000602536 740 ntBASIC18.95■□□□□ 0.62
MDH1P40925 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.95■□□□□ 0.62
MDH1P40925 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.95■□□□□ 0.62
MDH1P40925 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.95■□□□□ 0.62
MDH1P40925 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
MDH1P40925 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
MDH1P40925 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
MDH1P40925 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MDH1P40925 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
MDH1P40925 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MDH1P40925 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
MDH1P40925 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MDH1P40925 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
MDH1P40925 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MDH1P40925 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MDH1P40925 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MDH1P40925 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
MDH1P40925 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
MDH1P40925 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MDH1P40925 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.94■□□□□ 0.62
MDH1P40925 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MDH1P40925 AC027612.3-201ENST00000413684 1047 ntBASIC18.94■□□□□ 0.62
MDH1P40925 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.94■□□□□ 0.62
MDH1P40925 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.94■□□□□ 0.62
MDH1P40925 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.94■□□□□ 0.62
MDH1P40925 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MDH1P40925 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MDH1P40925 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MDH1P40925 AC093677.2-201ENST00000600169 1863 ntBASIC18.94■□□□□ 0.62
MDH1P40925 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
MDH1P40925 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MDH1P40925 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MDH1P40925 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
MDH1P40925 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
MDH1P40925 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
MDH1P40925 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.93■□□□□ 0.62
MDH1P40925 AC004854.2-201ENST00000608450 1441 ntBASIC18.93■□□□□ 0.62
MDH1P40925 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MDH1P40925 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MDH1P40925 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MDH1P40925 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.93■□□□□ 0.62
MDH1P40925 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
MDH1P40925 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
MDH1P40925 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MDH1P40925 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
MDH1P40925 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.93■□□□□ 0.62
MDH1P40925 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.93■□□□□ 0.62
MDH1P40925 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
MDH1P40925 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MDH1P40925 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.93■□□□□ 0.62
MDH1P40925 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MDH1P40925 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MDH1P40925 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.93■□□□□ 0.62
MDH1P40925 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.93■□□□□ 0.62
MDH1P40925 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MDH1P40925 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.93■□□□□ 0.62
MDH1P40925 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MDH1P40925 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.93■□□□□ 0.62
MDH1P40925 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MDH1P40925 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms