Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RXRBP28702 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
RXRBP28702 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
RXRBP28702 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RXRBP28702 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RXRBP28702 CCS-201ENST00000310190 942 ntTSL 5 BASIC24.71■■□□□ 1.55
RXRBP28702 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RXRBP28702 INIP-202ENST00000374236 874 ntTSL 2 BASIC24.71■■□□□ 1.55
RXRBP28702 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RXRBP28702 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC24.71■■□□□ 1.55
RXRBP28702 MCCD1P2-201ENST00000423228 335 ntBASIC24.71■■□□□ 1.55
RXRBP28702 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC24.71■■□□□ 1.55
RXRBP28702 CRCP-205ENST00000431089 942 ntTSL 2 BASIC24.71■■□□□ 1.55
RXRBP28702 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC24.71■■□□□ 1.55
RXRBP28702 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RXRBP28702 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC24.71■■□□□ 1.55
RXRBP28702 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC24.71■■□□□ 1.55
RXRBP28702 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC24.71■■□□□ 1.55
RXRBP28702 PNMT-203ENST00000581428 677 ntTSL 2 BASIC24.71■■□□□ 1.55
RXRBP28702 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
RXRBP28702 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
RXRBP28702 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC24.71■■□□□ 1.55
RXRBP28702 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC24.71■■□□□ 1.55
RXRBP28702 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.71■■□□□ 1.55
RXRBP28702 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
RXRBP28702 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC24.7■■□□□ 1.55
RXRBP28702 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC24.7■■□□□ 1.54
RXRBP28702 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC24.7■■□□□ 1.54
RXRBP28702 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC24.7■■□□□ 1.54
RXRBP28702 AC009533.2-201ENST00000543664 586 ntBASIC24.7■■□□□ 1.54
RXRBP28702 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC24.7■■□□□ 1.54
RXRBP28702 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC24.7■■□□□ 1.54
RXRBP28702 GZMM-202ENST00000592501 941 ntTSL 3 BASIC24.7■■□□□ 1.54
RXRBP28702 AL035252.4-201ENST00000624174 288 ntBASIC24.7■■□□□ 1.54
RXRBP28702 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC24.7■■□□□ 1.54
RXRBP28702 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RXRBP28702 Z98882.1-201ENST00000622160 2253 ntBASIC24.7■■□□□ 1.54
RXRBP28702 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RXRBP28702 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
RXRBP28702 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
RXRBP28702 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
RXRBP28702 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RXRBP28702 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC24.69■■□□□ 1.54
RXRBP28702 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RXRBP28702 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
RXRBP28702 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC24.69■■□□□ 1.54
RXRBP28702 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
RXRBP28702 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC24.69■■□□□ 1.54
RXRBP28702 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RXRBP28702 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC24.69■■□□□ 1.54
RXRBP28702 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC24.69■■□□□ 1.54
RXRBP28702 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC24.69■■□□□ 1.54
RXRBP28702 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC24.69■■□□□ 1.54
RXRBP28702 AC008735.5-201ENST00000623544 497 ntBASIC24.69■■□□□ 1.54
RXRBP28702 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RXRBP28702 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC24.69■■□□□ 1.54
RXRBP28702 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC24.69■■□□□ 1.54
RXRBP28702 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RXRBP28702 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RXRBP28702 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
RXRBP28702 AC063926.2-201ENST00000623766 1308 ntBASIC24.68■■□□□ 1.54
RXRBP28702 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RXRBP28702 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.68■■□□□ 1.54
RXRBP28702 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RXRBP28702 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RXRBP28702 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC24.68■■□□□ 1.54
RXRBP28702 AC005034.1-201ENST00000426657 489 ntBASIC24.68■■□□□ 1.54
RXRBP28702 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC24.68■■□□□ 1.54
RXRBP28702 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC24.68■■□□□ 1.54
RXRBP28702 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC24.68■■□□□ 1.54
RXRBP28702 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC24.68■■□□□ 1.54
RXRBP28702 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC24.68■■□□□ 1.54
RXRBP28702 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC24.68■■□□□ 1.54
RXRBP28702 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC24.68■■□□□ 1.54
RXRBP28702 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC24.68■■□□□ 1.54
RXRBP28702 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC24.68■■□□□ 1.54
RXRBP28702 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
RXRBP28702 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
RXRBP28702 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RXRBP28702 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.67■■□□□ 1.54
RXRBP28702 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RXRBP28702 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RXRBP28702 GK-202ENST00000378941 458 ntTSL 3 BASIC24.67■■□□□ 1.54
RXRBP28702 RAB17-203ENST00000409576 466 ntTSL 3 BASIC24.67■■□□□ 1.54
RXRBP28702 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC24.67■■□□□ 1.54
RXRBP28702 RBM7-207ENST00000544582 692 ntTSL 3 BASIC24.67■■□□□ 1.54
RXRBP28702 AC005336.2-201ENST00000593183 939 ntBASIC24.67■■□□□ 1.54
RXRBP28702 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC24.67■■□□□ 1.54
RXRBP28702 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RXRBP28702 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
RXRBP28702 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RXRBP28702 HOXB1-202ENST00000577092 1414 ntBASIC24.67■■□□□ 1.54
RXRBP28702 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RXRBP28702 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
RXRBP28702 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
RXRBP28702 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RXRBP28702 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RXRBP28702 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RXRBP28702 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC24.66■■□□□ 1.54
RXRBP28702 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms