Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.45■□□□□ 0.38
PRKCAP17252 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.45■□□□□ 0.38
PRKCAP17252 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PRKCAP17252 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.45■□□□□ 0.38
PRKCAP17252 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.45■□□□□ 0.38
PRKCAP17252 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 CD177P1-201ENST00000606252 935 ntBASIC17.45■□□□□ 0.38
PRKCAP17252 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.45■□□□□ 0.38
PRKCAP17252 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.45■□□□□ 0.38
PRKCAP17252 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.45■□□□□ 0.38
PRKCAP17252 AL049637.2-201ENST00000641778 930 ntBASIC17.45■□□□□ 0.38
PRKCAP17252 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PRKCAP17252 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.45■□□□□ 0.38
PRKCAP17252 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.45■□□□□ 0.38
PRKCAP17252 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PRKCAP17252 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.45■□□□□ 0.38
PRKCAP17252 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 TEX21P-204ENST00000641479 1693 ntBASIC17.45■□□□□ 0.38
PRKCAP17252 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PRKCAP17252 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRKCAP17252 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.45■□□□□ 0.38
PRKCAP17252 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.45■□□□□ 0.38
PRKCAP17252 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRKCAP17252 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRKCAP17252 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRKCAP17252 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRKCAP17252 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.44■□□□□ 0.38
PRKCAP17252 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRKCAP17252 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRKCAP17252 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRKCAP17252 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.44■□□□□ 0.38
PRKCAP17252 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.44■□□□□ 0.38
PRKCAP17252 MIR718-201ENST00000390190 70 ntBASIC17.44■□□□□ 0.38
PRKCAP17252 FAM197Y1-201ENST00000421178 764 ntBASIC17.44■□□□□ 0.38
PRKCAP17252 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.44■□□□□ 0.38
PRKCAP17252 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRKCAP17252 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.44■□□□□ 0.38
PRKCAP17252 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.44■□□□□ 0.38
PRKCAP17252 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRKCAP17252 AC026271.3-201ENST00000571884 352 ntBASIC17.44■□□□□ 0.38
PRKCAP17252 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.44■□□□□ 0.38
PRKCAP17252 AC113410.3-201ENST00000623366 203 ntBASIC17.44■□□□□ 0.38
PRKCAP17252 AL031985.4-201ENST00000642138 673 ntBASIC17.44■□□□□ 0.38
PRKCAP17252 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PRKCAP17252 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.44■□□□□ 0.38
PRKCAP17252 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRKCAP17252 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.44■□□□□ 0.38
PRKCAP17252 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRKCAP17252 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.44■□□□□ 0.38
PRKCAP17252 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRKCAP17252 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRKCAP17252 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRKCAP17252 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.44■□□□□ 0.38
PRKCAP17252 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.44■□□□□ 0.38
PRKCAP17252 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRKCAP17252 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRKCAP17252 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.43■□□□□ 0.38
PRKCAP17252 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.43■□□□□ 0.38
PRKCAP17252 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRKCAP17252 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRKCAP17252 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.43■□□□□ 0.38
PRKCAP17252 KRT8P41-201ENST00000533985 1514 ntBASIC17.43■□□□□ 0.38
PRKCAP17252 AC020763.4-201ENST00000623414 4170 ntBASIC17.43■□□□□ 0.38
PRKCAP17252 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.43■□□□□ 0.38
PRKCAP17252 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRKCAP17252 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PRKCAP17252 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRKCAP17252 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PRKCAP17252 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.43■□□□□ 0.38
PRKCAP17252 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRKCAP17252 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.43■□□□□ 0.38
PRKCAP17252 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRKCAP17252 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRKCAP17252 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRKCAP17252 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PRKCAP17252 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRKCAP17252 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRKCAP17252 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRKCAP17252 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PRKCAP17252 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PRKCAP17252 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.42■□□□□ 0.38
PRKCAP17252 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRKCAP17252 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRKCAP17252 AC141586.3-201ENST00000562166 1838 ntBASIC17.42■□□□□ 0.38
PRKCAP17252 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.42■□□□□ 0.38
PRKCAP17252 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRKCAP17252 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRKCAP17252 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRKCAP17252 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRKCAP17252 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms