Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 RCN1P1-201ENST00000400413 996 ntBASIC21.7■■□□□ 1.06
SCG2P13521 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCG2P13521 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCG2P13521 CROCCP3-202ENST00000420820 1947 ntBASIC21.7■■□□□ 1.06
SCG2P13521 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.7■■□□□ 1.06
SCG2P13521 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SCG2P13521 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SCG2P13521 AL109659.2-201ENST00000606809 1674 ntBASIC21.69■■□□□ 1.06
SCG2P13521 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.69■■□□□ 1.06
SCG2P13521 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.69■■□□□ 1.06
SCG2P13521 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.69■■□□□ 1.06
SCG2P13521 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SCG2P13521 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SCG2P13521 KRT18P22-201ENST00000402024 1347 ntBASIC21.69■■□□□ 1.06
SCG2P13521 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SCG2P13521 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCG2P13521 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.69■■□□□ 1.06
SCG2P13521 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SCG2P13521 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCG2P13521 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.69■■□□□ 1.06
SCG2P13521 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.69■■□□□ 1.06
SCG2P13521 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCG2P13521 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.69■■□□□ 1.06
SCG2P13521 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SCG2P13521 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCG2P13521 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCG2P13521 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.68■■□□□ 1.06
SCG2P13521 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCG2P13521 MCCD1P1-208ENST00000445732 328 ntBASIC21.68■■□□□ 1.06
SCG2P13521 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.68■■□□□ 1.06
SCG2P13521 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.68■■□□□ 1.06
SCG2P13521 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.68■■□□□ 1.06
SCG2P13521 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
SCG2P13521 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.68■■□□□ 1.06
SCG2P13521 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
SCG2P13521 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.68■■□□□ 1.06
SCG2P13521 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SCG2P13521 MTMR9LP-203ENST00000426597 1545 ntBASIC21.68■■□□□ 1.06
SCG2P13521 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCG2P13521 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.68■■□□□ 1.06
SCG2P13521 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.68■■□□□ 1.06
SCG2P13521 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
SCG2P13521 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCG2P13521 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.67■■□□□ 1.06
SCG2P13521 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.67■■□□□ 1.06
SCG2P13521 AC008556.1-201ENST00000610908 2040 ntBASIC21.67■■□□□ 1.06
SCG2P13521 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.67■■□□□ 1.06
SCG2P13521 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCG2P13521 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.67■■□□□ 1.06
SCG2P13521 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.67■■□□□ 1.06
SCG2P13521 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.67■■□□□ 1.06
SCG2P13521 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SCG2P13521 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCG2P13521 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCG2P13521 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.67■■□□□ 1.06
SCG2P13521 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.67■■□□□ 1.06
SCG2P13521 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SCG2P13521 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCG2P13521 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SCG2P13521 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCG2P13521 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCG2P13521 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCG2P13521 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SCG2P13521 AC093525.10-201ENST00000625130 1569 ntBASIC21.66■■□□□ 1.06
SCG2P13521 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCG2P13521 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.66■■□□□ 1.06
SCG2P13521 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCG2P13521 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCG2P13521 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SCG2P13521 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.66■■□□□ 1.06
SCG2P13521 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.66■■□□□ 1.06
SCG2P13521 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.66■■□□□ 1.06
SCG2P13521 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
SCG2P13521 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.66■■□□□ 1.06
SCG2P13521 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SCG2P13521 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.66■■□□□ 1.06
SCG2P13521 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.66■■□□□ 1.06
SCG2P13521 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCG2P13521 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.66■■□□□ 1.06
SCG2P13521 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SCG2P13521 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCG2P13521 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCG2P13521 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SCG2P13521 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCG2P13521 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCG2P13521 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.65■■□□□ 1.06
SCG2P13521 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SCG2P13521 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
SCG2P13521 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCG2P13521 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCG2P13521 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SCG2P13521 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
SCG2P13521 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SCG2P13521 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.65■■□□□ 1.06
SCG2P13521 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SCG2P13521 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCG2P13521 AC120498.9-201ENST00000339021 3867 ntBASIC21.65■■□□□ 1.06
SCG2P13521 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCG2P13521 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCG2P13521 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms