Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RAB40ALP0C0E4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RAB40ALP0C0E4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40ALP0C0E4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.76■□□□□ 0.43
RAB40ALP0C0E4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40ALP0C0E4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.76■□□□□ 0.43
RAB40ALP0C0E4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RAB40ALP0C0E4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40ALP0C0E4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40ALP0C0E4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.76■□□□□ 0.43
RAB40ALP0C0E4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RAB40ALP0C0E4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.76■□□□□ 0.43
RAB40ALP0C0E4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.76■□□□□ 0.43
RAB40ALP0C0E4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40ALP0C0E4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.76■□□□□ 0.43
RAB40ALP0C0E4 AC116407.4-201ENST00000623319 1061 ntBASIC17.76■□□□□ 0.43
RAB40ALP0C0E4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40ALP0C0E4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RAB40ALP0C0E4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40ALP0C0E4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.76■□□□□ 0.43
RAB40ALP0C0E4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
RAB40ALP0C0E4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.76■□□□□ 0.43
RAB40ALP0C0E4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40ALP0C0E4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 AC005332.1-201ENST00000577698 1310 ntBASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 ZNF444P1-201ENST00000559497 298 ntBASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40ALP0C0E4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 KRT8P3-201ENST00000519669 1449 ntBASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 HYMAI.1-201ENST00000620949 238 ntBASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 GPAT2P1-201ENST00000444924 1672 ntBASIC17.74■□□□□ 0.43
RAB40ALP0C0E4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RAB40ALP0C0E4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms