Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC24.83■■□□□ 1.57
COL5A2P05997 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
COL5A2P05997 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC24.83■■□□□ 1.56
COL5A2P05997 TLE1-202ENST00000376484 666 ntTSL 3 BASIC24.83■■□□□ 1.56
COL5A2P05997 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC24.83■■□□□ 1.56
COL5A2P05997 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC24.83■■□□□ 1.56
COL5A2P05997 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.56
COL5A2P05997 MIR3180-4-201ENST00000582223 153 ntBASIC24.83■■□□□ 1.56
COL5A2P05997 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
COL5A2P05997 MIR7706-201ENST00000613747 67 ntBASIC24.83■■□□□ 1.56
COL5A2P05997 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC24.83■■□□□ 1.56
COL5A2P05997 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
COL5A2P05997 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL5A2P05997 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC24.82■■□□□ 1.56
COL5A2P05997 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC24.82■■□□□ 1.56
COL5A2P05997 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC24.82■■□□□ 1.56
COL5A2P05997 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
COL5A2P05997 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
COL5A2P05997 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL5A2P05997 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL5A2P05997 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC24.82■■□□□ 1.56
COL5A2P05997 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC24.82■■□□□ 1.56
COL5A2P05997 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC24.82■■□□□ 1.56
COL5A2P05997 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL5A2P05997 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC24.82■■□□□ 1.56
COL5A2P05997 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
COL5A2P05997 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL5A2P05997 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL5A2P05997 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL5A2P05997 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
COL5A2P05997 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC24.81■■□□□ 1.56
COL5A2P05997 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
COL5A2P05997 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
COL5A2P05997 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC24.81■■□□□ 1.56
COL5A2P05997 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.81■■□□□ 1.56
COL5A2P05997 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC24.81■■□□□ 1.56
COL5A2P05997 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC24.81■■□□□ 1.56
COL5A2P05997 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
COL5A2P05997 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL5A2P05997 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
COL5A2P05997 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL5A2P05997 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC24.81■■□□□ 1.56
COL5A2P05997 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
COL5A2P05997 BNIP3P18-201ENST00000593976 575 ntBASIC24.81■■□□□ 1.56
COL5A2P05997 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC24.81■■□□□ 1.56
COL5A2P05997 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL5A2P05997 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC24.81■■□□□ 1.56
COL5A2P05997 AC007375.3-201ENST00000600936 2314 ntBASIC24.81■■□□□ 1.56
COL5A2P05997 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL5A2P05997 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL5A2P05997 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC24.8■■□□□ 1.56
COL5A2P05997 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL5A2P05997 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL5A2P05997 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL5A2P05997 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL5A2P05997 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL5A2P05997 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL5A2P05997 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC24.8■■□□□ 1.56
COL5A2P05997 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
COL5A2P05997 KRT18P67-201ENST00000432816 1264 ntBASIC24.8■■□□□ 1.56
COL5A2P05997 VENTXP7-201ENST00000475503 772 ntBASIC24.8■■□□□ 1.56
COL5A2P05997 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC24.8■■□□□ 1.56
COL5A2P05997 PPOX-214ENST00000535223 664 ntTSL 3 BASIC24.8■■□□□ 1.56
COL5A2P05997 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC24.8■■□□□ 1.56
COL5A2P05997 ABR-217ENST00000572441 563 ntTSL 4 BASIC24.8■■□□□ 1.56
COL5A2P05997 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC24.8■■□□□ 1.56
COL5A2P05997 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
COL5A2P05997 ABBA01031661.1-201ENST00000634362 1253 ntBASIC24.8■■□□□ 1.56
COL5A2P05997 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL5A2P05997 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL5A2P05997 USP39-204ENST00000409766 2033 ntTSL 2 BASIC24.8■■□□□ 1.56
COL5A2P05997 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
COL5A2P05997 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC24.8■■□□□ 1.56
COL5A2P05997 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC24.8■■□□□ 1.56
COL5A2P05997 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL5A2P05997 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL5A2P05997 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL5A2P05997 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
COL5A2P05997 AC243591.1-201ENST00000452967 1364 ntBASIC24.79■■□□□ 1.56
COL5A2P05997 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL5A2P05997 MIR564-202ENST00000385049 94 ntBASIC24.79■■□□□ 1.56
COL5A2P05997 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC24.79■■□□□ 1.56
COL5A2P05997 GUSBP12-201ENST00000513727 720 ntBASIC24.79■■□□□ 1.56
COL5A2P05997 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL5A2P05997 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL5A2P05997 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
COL5A2P05997 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
COL5A2P05997 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
COL5A2P05997 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
COL5A2P05997 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
COL5A2P05997 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
COL5A2P05997 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
COL5A2P05997 LBX2-AS1-202ENST00000603175 2083 ntBASIC24.78■■□□□ 1.56
COL5A2P05997 MOK-208ENST00000519058 917 ntTSL 2 BASIC24.78■■□□□ 1.56
COL5A2P05997 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC24.78■■□□□ 1.56
COL5A2P05997 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC24.78■■□□□ 1.56
COL5A2P05997 AC064862.7-201ENST00000604520 867 ntBASIC24.78■■□□□ 1.56
COL5A2P05997 AC148477.8-201ENST00000624298 468 ntBASIC24.78■■□□□ 1.56
COL5A2P05997 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
COL5A2P05997 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms