Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.12■□□□□ 0.65
HLA-DQB2P05538 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.12■□□□□ 0.65
HLA-DQB2P05538 CYP2D8P-201ENST00000433633 1490 ntBASIC19.12■□□□□ 0.65
HLA-DQB2P05538 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.12■□□□□ 0.65
HLA-DQB2P05538 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 AIRN-201ENST00000601203 4374 ntBASIC19.11■□□□□ 0.65
HLA-DQB2P05538 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 Z98044.1-201ENST00000632503 1764 ntBASIC19.11■□□□□ 0.65
HLA-DQB2P05538 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 GPAT2P1-201ENST00000444924 1672 ntBASIC19.11■□□□□ 0.65
HLA-DQB2P05538 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 MIR4674-201ENST00000582457 87 ntBASIC19.11■□□□□ 0.65
HLA-DQB2P05538 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 AL023803.3-201ENST00000615559 522 ntBASIC19.11■□□□□ 0.65
HLA-DQB2P05538 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 ANO7L1-203ENST00000602586 1720 ntBASIC19.11■□□□□ 0.65
HLA-DQB2P05538 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQB2P05538 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQB2P05538 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
HLA-DQB2P05538 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.1■□□□□ 0.65
HLA-DQB2P05538 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQB2P05538 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQB2P05538 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQB2P05538 MMP23A-201ENST00000234610 1017 ntBASIC19.1■□□□□ 0.65
HLA-DQB2P05538 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQB2P05538 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.1■□□□□ 0.65
HLA-DQB2P05538 AL023284.2-201ENST00000405850 579 ntBASIC19.1■□□□□ 0.65
HLA-DQB2P05538 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
HLA-DQB2P05538 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.1■□□□□ 0.65
HLA-DQB2P05538 SLC25A1P2-201ENST00000430693 912 ntBASIC19.1■□□□□ 0.65
HLA-DQB2P05538 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.1■□□□□ 0.65
HLA-DQB2P05538 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
HLA-DQB2P05538 BX088651.1-201ENST00000540551 451 ntBASIC19.1■□□□□ 0.65
HLA-DQB2P05538 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.1■□□□□ 0.65
HLA-DQB2P05538 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.1■□□□□ 0.65
HLA-DQB2P05538 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQB2P05538 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQB2P05538 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQB2P05538 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQB2P05538 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQB2P05538 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.1■□□□□ 0.65
HLA-DQB2P05538 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQB2P05538 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQB2P05538 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.1■□□□□ 0.65
HLA-DQB2P05538 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.09■□□□□ 0.65
HLA-DQB2P05538 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQB2P05538 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.09■□□□□ 0.65
HLA-DQB2P05538 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
HLA-DQB2P05538 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.09■□□□□ 0.65
HLA-DQB2P05538 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.09■□□□□ 0.65
HLA-DQB2P05538 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HLA-DQB2P05538 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
HLA-DQB2P05538 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.09■□□□□ 0.65
HLA-DQB2P05538 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.09■□□□□ 0.65
HLA-DQB2P05538 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.09■□□□□ 0.65
HLA-DQB2P05538 C2orf69P3-201ENST00000565542 1120 ntBASIC19.09■□□□□ 0.65
HLA-DQB2P05538 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQB2P05538 AC010947.1-201ENST00000623454 693 ntBASIC19.09■□□□□ 0.65
HLA-DQB2P05538 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms