Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
KRT6AP02538 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
KRT6AP02538 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT6AP02538 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT6AP02538 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT6AP02538 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT6AP02538 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
KRT6AP02538 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.28■□□□□ 0.52
KRT6AP02538 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.28■□□□□ 0.52
KRT6AP02538 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT6AP02538 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.27■□□□□ 0.52
KRT6AP02538 HTR7P1-202ENST00000624664 4411 ntBASIC18.27■□□□□ 0.52
KRT6AP02538 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT6AP02538 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT6AP02538 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.27■□□□□ 0.52
KRT6AP02538 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT6AP02538 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.27■□□□□ 0.52
KRT6AP02538 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.27■□□□□ 0.52
KRT6AP02538 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT6AP02538 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRT6AP02538 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.27■□□□□ 0.52
KRT6AP02538 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.27■□□□□ 0.52
KRT6AP02538 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.27■□□□□ 0.52
KRT6AP02538 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.27■□□□□ 0.52
KRT6AP02538 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.27■□□□□ 0.52
KRT6AP02538 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRT6AP02538 AL353708.3-201ENST00000610272 989 ntBASIC18.27■□□□□ 0.52
KRT6AP02538 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT6AP02538 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT6AP02538 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRT6AP02538 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT6AP02538 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
KRT6AP02538 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
KRT6AP02538 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
KRT6AP02538 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
KRT6AP02538 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.27■□□□□ 0.51
KRT6AP02538 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.27■□□□□ 0.51
KRT6AP02538 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
KRT6AP02538 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
KRT6AP02538 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
KRT6AP02538 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
KRT6AP02538 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT6AP02538 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
KRT6AP02538 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT6AP02538 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT6AP02538 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.26■□□□□ 0.51
KRT6AP02538 ANO7L1-203ENST00000602586 1720 ntBASIC18.26■□□□□ 0.51
KRT6AP02538 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.26■□□□□ 0.51
KRT6AP02538 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.26■□□□□ 0.51
KRT6AP02538 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT6AP02538 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
KRT6AP02538 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT6AP02538 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT6AP02538 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
KRT6AP02538 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT6AP02538 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.26■□□□□ 0.51
KRT6AP02538 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT6AP02538 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT6AP02538 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.26■□□□□ 0.51
KRT6AP02538 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.26■□□□□ 0.51
KRT6AP02538 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.26■□□□□ 0.51
KRT6AP02538 AL353807.1-201ENST00000427475 662 ntBASIC18.26■□□□□ 0.51
KRT6AP02538 POU5F1P3-201ENST00000428824 1078 ntBASIC18.26■□□□□ 0.51
KRT6AP02538 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
KRT6AP02538 AC128676.1-201ENST00000454392 318 ntBASIC18.26■□□□□ 0.51
KRT6AP02538 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.26■□□□□ 0.51
KRT6AP02538 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.26■□□□□ 0.51
KRT6AP02538 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.26■□□□□ 0.51
KRT6AP02538 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
KRT6AP02538 CD99P1-205ENST00000527459 561 ntBASIC18.26■□□□□ 0.51
KRT6AP02538 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.26■□□□□ 0.51
KRT6AP02538 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT6AP02538 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT6AP02538 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT6AP02538 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT6AP02538 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT6AP02538 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.26■□□□□ 0.51
KRT6AP02538 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
KRT6AP02538 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT6AP02538 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT6AP02538 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT6AP02538 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT6AP02538 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT6AP02538 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
KRT6AP02538 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT6AP02538 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
KRT6AP02538 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.25■□□□□ 0.51
KRT6AP02538 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT6AP02538 HTR7P1-201ENST00000538670 1336 ntBASIC18.25■□□□□ 0.51
KRT6AP02538 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.25■□□□□ 0.51
KRT6AP02538 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT6AP02538 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT6AP02538 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT6AP02538 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.25■□□□□ 0.51
KRT6AP02538 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT6AP02538 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT6AP02538 AC090164.3-201ENST00000610780 2143 ntBASIC18.25■□□□□ 0.51
KRT6AP02538 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT6AP02538 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT6AP02538 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms