Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD4P01730 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD4P01730 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CD4P01730 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD4P01730 DRAXINP1-201ENST00000437611 948 ntBASIC20.84■□□□□ 0.93
CD4P01730 TPSP2-201ENST00000561760 610 ntBASIC20.84■□□□□ 0.93
CD4P01730 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.84■□□□□ 0.93
CD4P01730 AL031008.1-201ENST00000619963 541 ntBASIC20.84■□□□□ 0.93
CD4P01730 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD4P01730 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD4P01730 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.84■□□□□ 0.93
CD4P01730 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CD4P01730 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD4P01730 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD4P01730 AL391807.1-203ENST00000604392 2365 ntBASIC20.83■□□□□ 0.93
CD4P01730 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD4P01730 KRT18P1-202ENST00000452408 1331 ntBASIC20.83■□□□□ 0.93
CD4P01730 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD4P01730 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD4P01730 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.83■□□□□ 0.93
CD4P01730 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CD4P01730 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.83■□□□□ 0.93
CD4P01730 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CD4P01730 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD4P01730 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CD4P01730 TSPY22P-201ENST00000427496 604 ntBASIC20.83■□□□□ 0.93
CD4P01730 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.83■□□□□ 0.93
CD4P01730 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CD4P01730 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.83■□□□□ 0.93
CD4P01730 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CD4P01730 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CD4P01730 AL136038.4-201ENST00000603606 1261 ntBASIC20.83■□□□□ 0.93
CD4P01730 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.83■□□□□ 0.93
CD4P01730 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD4P01730 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CD4P01730 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CD4P01730 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
CD4P01730 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD4P01730 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD4P01730 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD4P01730 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CD4P01730 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD4P01730 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CD4P01730 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD4P01730 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD4P01730 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CD4P01730 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD4P01730 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.82■□□□□ 0.92
CD4P01730 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CD4P01730 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CD4P01730 MIR3917-201ENST00000580971 93 ntBASIC20.82■□□□□ 0.92
CD4P01730 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.82■□□□□ 0.92
CD4P01730 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CD4P01730 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD4P01730 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD4P01730 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.82■□□□□ 0.92
CD4P01730 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD4P01730 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD4P01730 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD4P01730 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD4P01730 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.81■□□□□ 0.92
CD4P01730 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD4P01730 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.81■□□□□ 0.92
CD4P01730 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD4P01730 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD4P01730 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.81■□□□□ 0.92
CD4P01730 MCCD1P1-208ENST00000445732 328 ntBASIC20.81■□□□□ 0.92
CD4P01730 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CD4P01730 AL160237.2-201ENST00000556165 472 ntBASIC20.81■□□□□ 0.92
CD4P01730 RNF126P1-202ENST00000569893 925 ntBASIC20.81■□□□□ 0.92
CD4P01730 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.81■□□□□ 0.92
CD4P01730 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CD4P01730 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CD4P01730 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD4P01730 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.81■□□□□ 0.92
CD4P01730 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.81■□□□□ 0.92
CD4P01730 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD4P01730 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CD4P01730 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD4P01730 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CD4P01730 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CD4P01730 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.8■□□□□ 0.92
CD4P01730 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD4P01730 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD4P01730 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CD4P01730 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.8■□□□□ 0.92
CD4P01730 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.8■□□□□ 0.92
CD4P01730 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD4P01730 AC079781.3-201ENST00000449110 356 ntBASIC20.8■□□□□ 0.92
CD4P01730 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.8■□□□□ 0.92
CD4P01730 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.8■□□□□ 0.92
CD4P01730 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CD4P01730 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD4P01730 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.8■□□□□ 0.92
CD4P01730 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.8■□□□□ 0.92
CD4P01730 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CD4P01730 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD4P01730 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CD4P01730 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD4P01730 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms