Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TOP3BO95985 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TOP3BO95985 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TOP3BO95985 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.3■□□□□ 0.68
TOP3BO95985 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOP3BO95985 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOP3BO95985 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOP3BO95985 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TOP3BO95985 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.3■□□□□ 0.68
TOP3BO95985 AL138781.2-201ENST00000617896 1843 ntBASIC19.3■□□□□ 0.68
TOP3BO95985 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.3■□□□□ 0.68
TOP3BO95985 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.3■□□□□ 0.68
TOP3BO95985 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.3■□□□□ 0.68
TOP3BO95985 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOP3BO95985 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOP3BO95985 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
TOP3BO95985 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
TOP3BO95985 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOP3BO95985 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TOP3BO95985 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.3■□□□□ 0.68
TOP3BO95985 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOP3BO95985 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.3■□□□□ 0.68
TOP3BO95985 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.3■□□□□ 0.68
TOP3BO95985 AL031133.1-201ENST00000406807 723 ntBASIC19.3■□□□□ 0.68
TOP3BO95985 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TOP3BO95985 AC009947.2-201ENST00000444014 672 ntBASIC19.3■□□□□ 0.68
TOP3BO95985 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.3■□□□□ 0.68
TOP3BO95985 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.3■□□□□ 0.68
TOP3BO95985 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.3■□□□□ 0.68
TOP3BO95985 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TOP3BO95985 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.3■□□□□ 0.68
TOP3BO95985 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.3■□□□□ 0.68
TOP3BO95985 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOP3BO95985 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOP3BO95985 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TOP3BO95985 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TOP3BO95985 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOP3BO95985 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOP3BO95985 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TOP3BO95985 AC141586.3-201ENST00000562166 1838 ntBASIC19.3■□□□□ 0.68
TOP3BO95985 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.3■□□□□ 0.68
TOP3BO95985 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TOP3BO95985 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP3BO95985 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TOP3BO95985 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP3BO95985 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP3BO95985 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP3BO95985 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TOP3BO95985 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP3BO95985 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP3BO95985 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.29■□□□□ 0.68
TOP3BO95985 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TOP3BO95985 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TOP3BO95985 INGX-201ENST00000359239 846 ntBASIC19.29■□□□□ 0.68
TOP3BO95985 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.29■□□□□ 0.68
TOP3BO95985 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TOP3BO95985 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
TOP3BO95985 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.29■□□□□ 0.68
TOP3BO95985 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.29■□□□□ 0.68
TOP3BO95985 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.29■□□□□ 0.68
TOP3BO95985 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.29■□□□□ 0.68
TOP3BO95985 MYC-208ENST00000641036 567 ntBASIC19.29■□□□□ 0.68
TOP3BO95985 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP3BO95985 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP3BO95985 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP3BO95985 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP3BO95985 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP3BO95985 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TOP3BO95985 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP3BO95985 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TOP3BO95985 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOP3BO95985 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOP3BO95985 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.28■□□□□ 0.68
TOP3BO95985 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TOP3BO95985 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.28■□□□□ 0.68
TOP3BO95985 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TOP3BO95985 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.28■□□□□ 0.68
TOP3BO95985 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.28■□□□□ 0.68
TOP3BO95985 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOP3BO95985 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.28■□□□□ 0.68
TOP3BO95985 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.28■□□□□ 0.68
TOP3BO95985 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TOP3BO95985 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TOP3BO95985 AC009113.1-201ENST00000570267 2443 ntBASIC19.28■□□□□ 0.68
TOP3BO95985 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOP3BO95985 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOP3BO95985 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOP3BO95985 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOP3BO95985 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TOP3BO95985 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOP3BO95985 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOP3BO95985 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOP3BO95985 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.28■□□□□ 0.68
TOP3BO95985 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.28■□□□□ 0.68
TOP3BO95985 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.28■□□□□ 0.68
TOP3BO95985 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.28■□□□□ 0.68
TOP3BO95985 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.28■□□□□ 0.68
TOP3BO95985 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.28■□□□□ 0.68
TOP3BO95985 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.28■□□□□ 0.68
TOP3BO95985 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms