Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SNX4O95219 AC116562.2-201ENST00000507042 360 ntBASIC17.72■□□□□ 0.43
SNX4O95219 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.72■□□□□ 0.43
SNX4O95219 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.72■□□□□ 0.43
SNX4O95219 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNX4O95219 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX4O95219 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX4O95219 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX4O95219 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SNX4O95219 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNX4O95219 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.72■□□□□ 0.43
SNX4O95219 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX4O95219 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNX4O95219 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SNX4O95219 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX4O95219 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SNX4O95219 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX4O95219 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNX4O95219 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SNX4O95219 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX4O95219 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX4O95219 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.71■□□□□ 0.43
SNX4O95219 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.71■□□□□ 0.43
SNX4O95219 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.71■□□□□ 0.43
SNX4O95219 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.71■□□□□ 0.43
SNX4O95219 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX4O95219 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX4O95219 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.71■□□□□ 0.43
SNX4O95219 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SNX4O95219 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX4O95219 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.71■□□□□ 0.43
SNX4O95219 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.71■□□□□ 0.43
SNX4O95219 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.71■□□□□ 0.43
SNX4O95219 AC004980.1-204ENST00000429707 299 ntBASIC17.71■□□□□ 0.43
SNX4O95219 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.71■□□□□ 0.43
SNX4O95219 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX4O95219 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.71■□□□□ 0.43
SNX4O95219 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.71■□□□□ 0.43
SNX4O95219 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.71■□□□□ 0.43
SNX4O95219 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.71■□□□□ 0.43
SNX4O95219 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.71■□□□□ 0.43
SNX4O95219 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SNX4O95219 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX4O95219 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX4O95219 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX4O95219 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX4O95219 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX4O95219 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SNX4O95219 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SNX4O95219 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SNX4O95219 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SNX4O95219 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SNX4O95219 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SNX4O95219 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.7■□□□□ 0.42
SNX4O95219 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX4O95219 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNX4O95219 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX4O95219 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNX4O95219 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SNX4O95219 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SNX4O95219 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNX4O95219 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.7■□□□□ 0.42
SNX4O95219 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNX4O95219 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.7■□□□□ 0.42
SNX4O95219 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.7■□□□□ 0.42
SNX4O95219 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SNX4O95219 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SNX4O95219 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.7■□□□□ 0.42
SNX4O95219 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SNX4O95219 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SNX4O95219 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX4O95219 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNX4O95219 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNX4O95219 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.7■□□□□ 0.42
SNX4O95219 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX4O95219 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.7■□□□□ 0.42
SNX4O95219 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.7■□□□□ 0.42
SNX4O95219 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SNX4O95219 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.7■□□□□ 0.42
SNX4O95219 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SNX4O95219 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX4O95219 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
SNX4O95219 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX4O95219 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SNX4O95219 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.69■□□□□ 0.42
SNX4O95219 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX4O95219 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX4O95219 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX4O95219 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX4O95219 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX4O95219 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.69■□□□□ 0.42
SNX4O95219 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX4O95219 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX4O95219 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX4O95219 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX4O95219 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.69■□□□□ 0.42
SNX4O95219 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SNX4O95219 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX4O95219 UNC93B2-201ENST00000285383 730 ntBASIC17.69■□□□□ 0.42
SNX4O95219 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms