Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.83■□□□□ 0.28
CDRT1O95170 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDRT1O95170 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.83■□□□□ 0.28
CDRT1O95170 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDRT1O95170 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDRT1O95170 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDRT1O95170 AC099398.1-201ENST00000567919 2776 ntBASIC16.83■□□□□ 0.28
CDRT1O95170 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDRT1O95170 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.82■□□□□ 0.28
CDRT1O95170 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDRT1O95170 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.82■□□□□ 0.28
CDRT1O95170 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.82■□□□□ 0.28
CDRT1O95170 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDRT1O95170 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.82■□□□□ 0.28
CDRT1O95170 AC073592.3-201ENST00000625118 1834 ntBASIC16.82■□□□□ 0.28
CDRT1O95170 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CDRT1O95170 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDRT1O95170 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDRT1O95170 KRT17P1-201ENST00000399211 1546 ntBASIC16.82■□□□□ 0.28
CDRT1O95170 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDRT1O95170 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDRT1O95170 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.82■□□□□ 0.28
CDRT1O95170 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDRT1O95170 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDRT1O95170 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDRT1O95170 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDRT1O95170 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDRT1O95170 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDRT1O95170 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.82■□□□□ 0.28
CDRT1O95170 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDRT1O95170 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.82■□□□□ 0.28
CDRT1O95170 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDRT1O95170 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDRT1O95170 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDRT1O95170 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.82■□□□□ 0.28
CDRT1O95170 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDRT1O95170 AC126763.1-201ENST00000552015 2118 ntBASIC16.82■□□□□ 0.28
CDRT1O95170 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDRT1O95170 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDRT1O95170 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDRT1O95170 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDRT1O95170 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.82■□□□□ 0.28
CDRT1O95170 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.82■□□□□ 0.28
CDRT1O95170 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDRT1O95170 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.82■□□□□ 0.28
CDRT1O95170 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDRT1O95170 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDRT1O95170 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDRT1O95170 AC104417.2-201ENST00000562989 1793 ntBASIC16.82■□□□□ 0.28
CDRT1O95170 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDRT1O95170 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDRT1O95170 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDRT1O95170 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CDRT1O95170 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDRT1O95170 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.81■□□□□ 0.28
CDRT1O95170 AL162741.1-201ENST00000565563 1558 ntBASIC16.81■□□□□ 0.28
CDRT1O95170 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDRT1O95170 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDRT1O95170 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDRT1O95170 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDRT1O95170 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDRT1O95170 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDRT1O95170 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDRT1O95170 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDRT1O95170 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDRT1O95170 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDRT1O95170 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CDRT1O95170 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.81■□□□□ 0.28
CDRT1O95170 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDRT1O95170 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CDRT1O95170 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.81■□□□□ 0.28
CDRT1O95170 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.81■□□□□ 0.28
CDRT1O95170 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDRT1O95170 AC026271.2-201ENST00000428091 497 ntBASIC16.81■□□□□ 0.28
CDRT1O95170 AC093787.1-201ENST00000450396 207 ntBASIC16.81■□□□□ 0.28
CDRT1O95170 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDRT1O95170 OR10C1-204ENST00000622521 1039 ntBASIC16.81■□□□□ 0.28
CDRT1O95170 AC083906.6-201ENST00000641366 219 ntBASIC16.81■□□□□ 0.28
CDRT1O95170 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDRT1O95170 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDRT1O95170 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDRT1O95170 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.81■□□□□ 0.28
CDRT1O95170 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.81■□□□□ 0.28
CDRT1O95170 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDRT1O95170 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.81■□□□□ 0.28
CDRT1O95170 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDRT1O95170 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDRT1O95170 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDRT1O95170 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.8■□□□□ 0.28
CDRT1O95170 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDRT1O95170 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDRT1O95170 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDRT1O95170 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.8■□□□□ 0.28
CDRT1O95170 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.8■□□□□ 0.28
CDRT1O95170 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDRT1O95170 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDRT1O95170 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDRT1O95170 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDRT1O95170 FEM1AP3-201ENST00000403722 1741 ntBASIC16.8■□□□□ 0.28
CDRT1O95170 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms