Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDUFS3O75489 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NDUFS3O75489 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
NDUFS3O75489 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.82■□□□□ 0.6
NDUFS3O75489 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDUFS3O75489 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NDUFS3O75489 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.81■□□□□ 0.6
NDUFS3O75489 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFS3O75489 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFS3O75489 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFS3O75489 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFS3O75489 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NDUFS3O75489 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NDUFS3O75489 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFS3O75489 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFS3O75489 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.81■□□□□ 0.6
NDUFS3O75489 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
NDUFS3O75489 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.81■□□□□ 0.6
NDUFS3O75489 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
NDUFS3O75489 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.81■□□□□ 0.6
NDUFS3O75489 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFS3O75489 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFS3O75489 NUDT16P1-203ENST00000513809 620 ntBASIC18.81■□□□□ 0.6
NDUFS3O75489 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.81■□□□□ 0.6
NDUFS3O75489 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.81■□□□□ 0.6
NDUFS3O75489 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.81■□□□□ 0.6
NDUFS3O75489 AC113410.3-201ENST00000623366 203 ntBASIC18.81■□□□□ 0.6
NDUFS3O75489 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFS3O75489 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NDUFS3O75489 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NDUFS3O75489 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFS3O75489 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFS3O75489 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.81■□□□□ 0.6
NDUFS3O75489 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.81■□□□□ 0.6
NDUFS3O75489 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.81■□□□□ 0.6
NDUFS3O75489 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFS3O75489 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS3O75489 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS3O75489 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS3O75489 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
NDUFS3O75489 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.8■□□□□ 0.6
NDUFS3O75489 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS3O75489 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.8■□□□□ 0.6
NDUFS3O75489 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.8■□□□□ 0.6
NDUFS3O75489 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.8■□□□□ 0.6
NDUFS3O75489 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.8■□□□□ 0.6
NDUFS3O75489 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.8■□□□□ 0.6
NDUFS3O75489 CKBP1-201ENST00000565489 1086 ntBASIC18.8■□□□□ 0.6
NDUFS3O75489 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.8■□□□□ 0.6
NDUFS3O75489 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS3O75489 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS3O75489 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS3O75489 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS3O75489 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS3O75489 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS3O75489 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS3O75489 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
NDUFS3O75489 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS3O75489 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.8■□□□□ 0.6
NDUFS3O75489 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.8■□□□□ 0.6
NDUFS3O75489 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFS3O75489 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS3O75489 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS3O75489 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.79■□□□□ 0.6
NDUFS3O75489 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS3O75489 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS3O75489 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS3O75489 Z98044.1-201ENST00000632503 1764 ntBASIC18.79■□□□□ 0.6
NDUFS3O75489 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS3O75489 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS3O75489 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NDUFS3O75489 MESTP1-201ENST00000404287 994 ntBASIC18.79■□□□□ 0.6
NDUFS3O75489 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.79■□□□□ 0.6
NDUFS3O75489 AL355355.2-201ENST00000442321 338 ntBASIC18.79■□□□□ 0.6
NDUFS3O75489 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS3O75489 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.79■□□□□ 0.6
NDUFS3O75489 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.79■□□□□ 0.6
NDUFS3O75489 Z99916.2-201ENST00000604037 246 ntBASIC18.79■□□□□ 0.6
NDUFS3O75489 AP000692.2-201ENST00000608391 879 ntBASIC18.79■□□□□ 0.6
NDUFS3O75489 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.79■□□□□ 0.6
NDUFS3O75489 AC093525.10-201ENST00000625130 1569 ntBASIC18.79■□□□□ 0.6
NDUFS3O75489 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
NDUFS3O75489 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS3O75489 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.79■□□□□ 0.6
NDUFS3O75489 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS3O75489 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.79■□□□□ 0.6
NDUFS3O75489 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS3O75489 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
NDUFS3O75489 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS3O75489 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
NDUFS3O75489 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFS3O75489 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFS3O75489 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFS3O75489 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NDUFS3O75489 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
NDUFS3O75489 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFS3O75489 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFS3O75489 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFS3O75489 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFS3O75489 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms