Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
URB1O60287 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.79■□□□□ 0.44
URB1O60287 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.79■□□□□ 0.44
URB1O60287 SEC1P-202ENST00000473944 940 ntBASIC17.79■□□□□ 0.44
URB1O60287 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.79■□□□□ 0.44
URB1O60287 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
URB1O60287 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.79■□□□□ 0.44
URB1O60287 AC138894.3-201ENST00000603787 634 ntBASIC17.79■□□□□ 0.44
URB1O60287 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.79■□□□□ 0.44
URB1O60287 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
URB1O60287 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.79■□□□□ 0.44
URB1O60287 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
URB1O60287 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
URB1O60287 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
URB1O60287 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
URB1O60287 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.78■□□□□ 0.44
URB1O60287 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.78■□□□□ 0.44
URB1O60287 MIR4674-201ENST00000582457 87 ntBASIC17.78■□□□□ 0.44
URB1O60287 REXO1L6P-202ENST00000619970 1078 ntBASIC17.78■□□□□ 0.44
URB1O60287 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
URB1O60287 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
URB1O60287 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
URB1O60287 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.78■□□□□ 0.44
URB1O60287 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
URB1O60287 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
URB1O60287 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
URB1O60287 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
URB1O60287 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
URB1O60287 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
URB1O60287 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
URB1O60287 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.78■□□□□ 0.44
URB1O60287 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
URB1O60287 AP001005.1-201ENST00000571755 1248 ntBASIC17.78■□□□□ 0.44
URB1O60287 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.78■□□□□ 0.44
URB1O60287 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.78■□□□□ 0.44
URB1O60287 TERC-201ENST00000602385 541 ntBASIC17.78■□□□□ 0.44
URB1O60287 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
URB1O60287 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
URB1O60287 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
URB1O60287 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.77■□□□□ 0.44
URB1O60287 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
URB1O60287 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
URB1O60287 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
URB1O60287 AL391807.1-203ENST00000604392 2365 ntBASIC17.77■□□□□ 0.44
URB1O60287 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.77■□□□□ 0.44
URB1O60287 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.77■□□□□ 0.44
URB1O60287 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.77■□□□□ 0.44
URB1O60287 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
URB1O60287 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
URB1O60287 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
URB1O60287 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.77■□□□□ 0.43
URB1O60287 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
URB1O60287 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
URB1O60287 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
URB1O60287 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.77■□□□□ 0.43
URB1O60287 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
URB1O60287 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
URB1O60287 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
URB1O60287 FEM1AP1-201ENST00000431297 1995 ntBASIC17.76■□□□□ 0.43
URB1O60287 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
URB1O60287 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
URB1O60287 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.76■□□□□ 0.43
URB1O60287 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
URB1O60287 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
URB1O60287 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
URB1O60287 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
URB1O60287 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
URB1O60287 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.76■□□□□ 0.43
URB1O60287 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
URB1O60287 AF238378.1-201ENST00000526806 358 ntBASIC17.76■□□□□ 0.43
URB1O60287 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.76■□□□□ 0.43
URB1O60287 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
URB1O60287 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.76■□□□□ 0.43
URB1O60287 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.76■□□□□ 0.43
URB1O60287 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
URB1O60287 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
URB1O60287 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
URB1O60287 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
URB1O60287 AC112907.3-201ENST00000577781 2400 ntBASIC17.76■□□□□ 0.43
URB1O60287 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
URB1O60287 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.76■□□□□ 0.43
URB1O60287 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
URB1O60287 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
URB1O60287 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
URB1O60287 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
URB1O60287 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
URB1O60287 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
URB1O60287 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.75■□□□□ 0.43
URB1O60287 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
URB1O60287 BX842568.4-201ENST00000421222 227 ntBASIC17.75■□□□□ 0.43
URB1O60287 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
URB1O60287 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.75■□□□□ 0.43
URB1O60287 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
URB1O60287 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
URB1O60287 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.75■□□□□ 0.43
URB1O60287 AC024243.1-201ENST00000609234 778 ntBASIC17.75■□□□□ 0.43
URB1O60287 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
URB1O60287 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
URB1O60287 AL157384.1-201ENST00000445995 2473 ntBASIC17.75■□□□□ 0.43
URB1O60287 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms