Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CXCL13O43927 AL023284.2-201ENST00000405850 579 ntBASIC16.88■□□□□ 0.29
CXCL13O43927 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.88■□□□□ 0.29
CXCL13O43927 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.88■□□□□ 0.29
CXCL13O43927 FAM210CP-201ENST00000445714 574 ntBASIC16.88■□□□□ 0.29
CXCL13O43927 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CXCL13O43927 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL13O43927 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.88■□□□□ 0.29
CXCL13O43927 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL13O43927 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.88■□□□□ 0.29
CXCL13O43927 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL13O43927 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL13O43927 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL13O43927 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL13O43927 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL13O43927 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CXCL13O43927 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL13O43927 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL13O43927 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL13O43927 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL13O43927 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL13O43927 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CXCL13O43927 AL512353.2-201ENST00000448759 1962 ntBASIC16.88■□□□□ 0.29
CXCL13O43927 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL13O43927 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL13O43927 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL13O43927 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.87■□□□□ 0.29
CXCL13O43927 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL13O43927 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL13O43927 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.87■□□□□ 0.29
CXCL13O43927 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.87■□□□□ 0.29
CXCL13O43927 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CXCL13O43927 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL13O43927 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL13O43927 TMPOP1-202ENST00000424642 1267 ntBASIC16.87■□□□□ 0.29
CXCL13O43927 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.87■□□□□ 0.29
CXCL13O43927 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.87■□□□□ 0.29
CXCL13O43927 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.87■□□□□ 0.29
CXCL13O43927 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL13O43927 AC092865.7-201ENST00000641832 219 ntBASIC16.87■□□□□ 0.29
CXCL13O43927 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.87■□□□□ 0.29
CXCL13O43927 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.87■□□□□ 0.29
CXCL13O43927 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL13O43927 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL13O43927 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL13O43927 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL13O43927 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL13O43927 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CXCL13O43927 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL13O43927 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
CXCL13O43927 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL13O43927 AC073508.3-201ENST00000619697 1419 ntBASIC16.87■□□□□ 0.29
CXCL13O43927 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CXCL13O43927 RCC2P3-201ENST00000418112 1537 ntBASIC16.86■□□□□ 0.29
CXCL13O43927 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.86■□□□□ 0.29
CXCL13O43927 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL13O43927 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL13O43927 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.86■□□□□ 0.29
CXCL13O43927 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL13O43927 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL13O43927 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL13O43927 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL13O43927 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL13O43927 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.86■□□□□ 0.29
CXCL13O43927 MCCD1P1-208ENST00000445732 328 ntBASIC16.86■□□□□ 0.29
CXCL13O43927 AL512604.3-201ENST00000569583 964 ntBASIC16.86■□□□□ 0.29
CXCL13O43927 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL13O43927 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL13O43927 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.86■□□□□ 0.29
CXCL13O43927 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL13O43927 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CXCL13O43927 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CXCL13O43927 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL13O43927 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.86■□□□□ 0.29
CXCL13O43927 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL13O43927 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL13O43927 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CXCL13O43927 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL13O43927 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.86■□□□□ 0.29
CXCL13O43927 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.86■□□□□ 0.29
CXCL13O43927 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.86■□□□□ 0.29
CXCL13O43927 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL13O43927 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL13O43927 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CXCL13O43927 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CXCL13O43927 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CXCL13O43927 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.85■□□□□ 0.29
CXCL13O43927 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.85■□□□□ 0.29
CXCL13O43927 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CXCL13O43927 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CXCL13O43927 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CXCL13O43927 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.85■□□□□ 0.29
CXCL13O43927 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CXCL13O43927 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CXCL13O43927 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CXCL13O43927 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.85■□□□□ 0.29
CXCL13O43927 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CXCL13O43927 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.85■□□□□ 0.29
CXCL13O43927 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CXCL13O43927 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms