Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDELR3O43731 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KDELR3O43731 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
KDELR3O43731 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDELR3O43731 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KDELR3O43731 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.13■□□□□ 0.65
KDELR3O43731 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.13■□□□□ 0.65
KDELR3O43731 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDELR3O43731 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDELR3O43731 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KDELR3O43731 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDELR3O43731 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.13■□□□□ 0.65
KDELR3O43731 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.13■□□□□ 0.65
KDELR3O43731 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.13■□□□□ 0.65
KDELR3O43731 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.13■□□□□ 0.65
KDELR3O43731 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.13■□□□□ 0.65
KDELR3O43731 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.13■□□□□ 0.65
KDELR3O43731 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDELR3O43731 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
KDELR3O43731 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KDELR3O43731 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
KDELR3O43731 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.13■□□□□ 0.65
KDELR3O43731 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDELR3O43731 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDELR3O43731 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDELR3O43731 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KDELR3O43731 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDELR3O43731 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.13■□□□□ 0.65
KDELR3O43731 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDELR3O43731 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDELR3O43731 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDELR3O43731 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
KDELR3O43731 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDELR3O43731 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDELR3O43731 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
KDELR3O43731 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDELR3O43731 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDELR3O43731 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.12■□□□□ 0.65
KDELR3O43731 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KDELR3O43731 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDELR3O43731 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDELR3O43731 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDELR3O43731 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDELR3O43731 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KDELR3O43731 KRT18P57-201ENST00000443599 1254 ntBASIC19.12■□□□□ 0.65
KDELR3O43731 KRT18P21-201ENST00000515767 1272 ntBASIC19.12■□□□□ 0.65
KDELR3O43731 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.12■□□□□ 0.65
KDELR3O43731 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDELR3O43731 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDELR3O43731 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDELR3O43731 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
KDELR3O43731 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KDELR3O43731 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.11■□□□□ 0.65
KDELR3O43731 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KDELR3O43731 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KDELR3O43731 AC036111.1-201ENST00000533973 1582 ntBASIC19.11■□□□□ 0.65
KDELR3O43731 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KDELR3O43731 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KDELR3O43731 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
KDELR3O43731 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KDELR3O43731 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KDELR3O43731 FAM210CP-201ENST00000445714 574 ntBASIC19.11■□□□□ 0.65
KDELR3O43731 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
KDELR3O43731 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
KDELR3O43731 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.11■□□□□ 0.65
KDELR3O43731 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.11■□□□□ 0.65
KDELR3O43731 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
KDELR3O43731 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
KDELR3O43731 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.11■□□□□ 0.65
KDELR3O43731 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.11■□□□□ 0.65
KDELR3O43731 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.11■□□□□ 0.65
KDELR3O43731 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.11■□□□□ 0.65
KDELR3O43731 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KDELR3O43731 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KDELR3O43731 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.1■□□□□ 0.65
KDELR3O43731 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
KDELR3O43731 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.1■□□□□ 0.65
KDELR3O43731 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KDELR3O43731 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.1■□□□□ 0.65
KDELR3O43731 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KDELR3O43731 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KDELR3O43731 MIR564-202ENST00000385049 94 ntBASIC19.1■□□□□ 0.65
KDELR3O43731 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
KDELR3O43731 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.1■□□□□ 0.65
KDELR3O43731 BX664615.1-201ENST00000443558 458 ntBASIC19.1■□□□□ 0.65
KDELR3O43731 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.1■□□□□ 0.65
KDELR3O43731 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.1■□□□□ 0.65
KDELR3O43731 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
KDELR3O43731 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.1■□□□□ 0.65
KDELR3O43731 RN7SL850P-201ENST00000579959 291 ntBASIC19.1■□□□□ 0.65
KDELR3O43731 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.1■□□□□ 0.65
KDELR3O43731 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.1■□□□□ 0.65
KDELR3O43731 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
KDELR3O43731 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KDELR3O43731 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.1■□□□□ 0.65
KDELR3O43731 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KDELR3O43731 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KDELR3O43731 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
KDELR3O43731 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KDELR3O43731 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms