Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF113AO15541 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
RNF113AO15541 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
RNF113AO15541 AC018445.3-201ENST00000624177 1945 ntBASIC22.63■■□□□ 1.21
RNF113AO15541 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
RNF113AO15541 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
RNF113AO15541 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF113AO15541 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
RNF113AO15541 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF113AO15541 NFYC-AS1-201ENST00000606277 1687 ntBASIC22.63■■□□□ 1.21
RNF113AO15541 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF113AO15541 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF113AO15541 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
RNF113AO15541 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC22.63■■□□□ 1.21
RNF113AO15541 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RNF113AO15541 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC22.63■■□□□ 1.21
RNF113AO15541 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF113AO15541 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF113AO15541 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF113AO15541 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.63■■□□□ 1.21
RNF113AO15541 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF113AO15541 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC22.62■■□□□ 1.21
RNF113AO15541 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF113AO15541 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF113AO15541 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF113AO15541 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF113AO15541 RCN1P1-201ENST00000400413 996 ntBASIC22.62■■□□□ 1.21
RNF113AO15541 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC22.62■■□□□ 1.21
RNF113AO15541 WWOX-216ENST00000569818 525 ntBASIC22.62■■□□□ 1.21
RNF113AO15541 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF113AO15541 MIR3180-5-201ENST00000583743 153 ntBASIC22.62■■□□□ 1.21
RNF113AO15541 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF113AO15541 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
RNF113AO15541 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC22.62■■□□□ 1.21
RNF113AO15541 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
RNF113AO15541 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF113AO15541 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF113AO15541 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC22.62■■□□□ 1.21
RNF113AO15541 MTMR9LP-203ENST00000426597 1545 ntBASIC22.62■■□□□ 1.21
RNF113AO15541 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF113AO15541 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF113AO15541 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
RNF113AO15541 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC22.61■■□□□ 1.21
RNF113AO15541 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF113AO15541 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF113AO15541 ENSA-205ENST00000361532 792 ntTSL 2 BASIC22.61■■□□□ 1.21
RNF113AO15541 ILF2-202ENST00000368681 726 ntTSL 2 BASIC22.61■■□□□ 1.21
RNF113AO15541 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC22.61■■□□□ 1.21
RNF113AO15541 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC22.61■■□□□ 1.21
RNF113AO15541 AC036111.1-201ENST00000533973 1582 ntBASIC22.61■■□□□ 1.21
RNF113AO15541 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC22.61■■□□□ 1.21
RNF113AO15541 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC22.61■■□□□ 1.21
RNF113AO15541 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC22.61■■□□□ 1.21
RNF113AO15541 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RNF113AO15541 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF113AO15541 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF113AO15541 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC22.61■■□□□ 1.21
RNF113AO15541 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RNF113AO15541 AC098818.2-201ENST00000564925 2320 ntBASIC22.6■■□□□ 1.21
RNF113AO15541 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
RNF113AO15541 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RNF113AO15541 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF113AO15541 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF113AO15541 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RNF113AO15541 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RNF113AO15541 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF113AO15541 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC22.6■■□□□ 1.21
RNF113AO15541 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC22.6■■□□□ 1.21
RNF113AO15541 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC22.6■■□□□ 1.21
RNF113AO15541 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF113AO15541 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC22.6■■□□□ 1.21
RNF113AO15541 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RNF113AO15541 LIN28AP1-201ENST00000429574 405 ntBASIC22.6■■□□□ 1.21
RNF113AO15541 KRT18P57-201ENST00000443599 1254 ntBASIC22.6■■□□□ 1.21
RNF113AO15541 AL512604.3-201ENST00000569583 964 ntBASIC22.6■■□□□ 1.21
RNF113AO15541 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RNF113AO15541 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC22.6■■□□□ 1.21
RNF113AO15541 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC22.59■■□□□ 1.21
RNF113AO15541 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC22.59■■□□□ 1.21
RNF113AO15541 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF113AO15541 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RNF113AO15541 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF113AO15541 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF113AO15541 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF113AO15541 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF113AO15541 MIR564-202ENST00000385049 94 ntBASIC22.59■■□□□ 1.21
RNF113AO15541 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RNF113AO15541 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF113AO15541 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF113AO15541 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
RNF113AO15541 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC22.59■■□□□ 1.21
RNF113AO15541 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.59■■□□□ 1.21
RNF113AO15541 AC141257.4-201ENST00000634557 245 ntBASIC22.59■■□□□ 1.21
RNF113AO15541 AC136944.6-201ENST00000634818 245 ntBASIC22.59■■□□□ 1.21
RNF113AO15541 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC22.59■■□□□ 1.21
RNF113AO15541 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.59■■□□□ 1.21
RNF113AO15541 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC22.59■■□□□ 1.21
RNF113AO15541 LGALS8-AS1-201ENST00000487567 1457 ntBASIC22.59■■□□□ 1.21
RNF113AO15541 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
RNF113AO15541 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms