Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TNRC18O15417 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.52■□□□□ 0.88
TNRC18O15417 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.52■□□□□ 0.88
TNRC18O15417 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.52■□□□□ 0.88
TNRC18O15417 AP002414.3-201ENST00000589352 1468 ntBASIC20.52■□□□□ 0.88
TNRC18O15417 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC20.52■□□□□ 0.87
TNRC18O15417 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.52■□□□□ 0.87
TNRC18O15417 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
TNRC18O15417 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.52■□□□□ 0.87
TNRC18O15417 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNRC18O15417 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNRC18O15417 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TNRC18O15417 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.51■□□□□ 0.87
TNRC18O15417 MRPL20P1-201ENST00000400819 433 ntBASIC20.51■□□□□ 0.87
TNRC18O15417 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.51■□□□□ 0.87
TNRC18O15417 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNRC18O15417 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.51■□□□□ 0.87
TNRC18O15417 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.51■□□□□ 0.87
TNRC18O15417 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNRC18O15417 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.51■□□□□ 0.87
TNRC18O15417 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.51■□□□□ 0.87
TNRC18O15417 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.51■□□□□ 0.87
TNRC18O15417 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.51■□□□□ 0.87
TNRC18O15417 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNRC18O15417 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.51■□□□□ 0.87
TNRC18O15417 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.51■□□□□ 0.87
TNRC18O15417 AL359881.2-201ENST00000602973 570 ntBASIC20.51■□□□□ 0.87
TNRC18O15417 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.51■□□□□ 0.87
TNRC18O15417 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.51■□□□□ 0.87
TNRC18O15417 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.51■□□□□ 0.87
TNRC18O15417 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNRC18O15417 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNRC18O15417 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNRC18O15417 MKNK2P1-201ENST00000437526 628 ntBASIC20.5■□□□□ 0.87
TNRC18O15417 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNRC18O15417 PDPK2P-202ENST00000562415 1191 ntBASIC20.5■□□□□ 0.87
TNRC18O15417 AC092865.6-201ENST00000642101 219 ntBASIC20.5■□□□□ 0.87
TNRC18O15417 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNRC18O15417 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNRC18O15417 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.5■□□□□ 0.87
TNRC18O15417 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNRC18O15417 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.5■□□□□ 0.87
TNRC18O15417 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.5■□□□□ 0.87
TNRC18O15417 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNRC18O15417 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNRC18O15417 MIR661-201ENST00000384842 89 ntBASIC20.5■□□□□ 0.87
TNRC18O15417 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TNRC18O15417 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.5■□□□□ 0.87
TNRC18O15417 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.5■□□□□ 0.87
TNRC18O15417 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.5■□□□□ 0.87
TNRC18O15417 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TNRC18O15417 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNRC18O15417 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC20.49■□□□□ 0.87
TNRC18O15417 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.49■□□□□ 0.87
TNRC18O15417 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNRC18O15417 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNRC18O15417 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNRC18O15417 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNRC18O15417 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNRC18O15417 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TNRC18O15417 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNRC18O15417 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNRC18O15417 EDF1-203ENST00000371649 790 ntTSL 2 BASIC20.49■□□□□ 0.87
TNRC18O15417 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC20.49■□□□□ 0.87
TNRC18O15417 KRT18P2-201ENST00000447938 1258 ntBASIC20.49■□□□□ 0.87
TNRC18O15417 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNRC18O15417 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.49■□□□□ 0.87
TNRC18O15417 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNRC18O15417 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNRC18O15417 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNRC18O15417 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNRC18O15417 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNRC18O15417 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.49■□□□□ 0.87
TNRC18O15417 AC010240.3-201ENST00000607688 395 ntBASIC20.49■□□□□ 0.87
TNRC18O15417 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNRC18O15417 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNRC18O15417 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNRC18O15417 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNRC18O15417 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TNRC18O15417 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.48■□□□□ 0.87
TNRC18O15417 AC011840.4-201ENST00000578471 627 ntBASIC20.48■□□□□ 0.87
TNRC18O15417 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC20.48■□□□□ 0.87
TNRC18O15417 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNRC18O15417 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNRC18O15417 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNRC18O15417 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TNRC18O15417 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TNRC18O15417 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.48■□□□□ 0.87
TNRC18O15417 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TNRC18O15417 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNRC18O15417 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TNRC18O15417 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
TNRC18O15417 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.47■□□□□ 0.87
TNRC18O15417 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNRC18O15417 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TNRC18O15417 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNRC18O15417 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNRC18O15417 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNRC18O15417 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.47■□□□□ 0.87
TNRC18O15417 AC109322.1-201ENST00000524499 1264 ntBASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms