Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 COA5-202ENST00000409997 557 ntTSL 4 BASIC30.54■■■□□ 2.48
CHD1O14646 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC30.54■■■□□ 2.48
CHD1O14646 KRT18P3-201ENST00000451602 1288 ntBASIC30.54■■■□□ 2.48
CHD1O14646 RNA5SP415-201ENST00000517246 115 ntBASIC30.54■■■□□ 2.48
CHD1O14646 GZMM-202ENST00000592501 941 ntTSL 3 BASIC30.54■■■□□ 2.48
CHD1O14646 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CHD1O14646 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CHD1O14646 PMP22-202ENST00000395936 816 ntTSL 3 BASIC30.53■■■□□ 2.48
CHD1O14646 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC30.53■■■□□ 2.48
CHD1O14646 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC30.53■■■□□ 2.48
CHD1O14646 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC30.53■■■□□ 2.48
CHD1O14646 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CHD1O14646 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC30.53■■■□□ 2.48
CHD1O14646 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC30.53■■■□□ 2.48
CHD1O14646 MIR5100-201ENST00000579544 119 ntBASIC30.53■■■□□ 2.48
CHD1O14646 NAT14-202ENST00000587400 416 ntTSL 5 BASIC30.53■■■□□ 2.48
CHD1O14646 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC30.53■■■□□ 2.48
CHD1O14646 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC30.53■■■□□ 2.48
CHD1O14646 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
CHD1O14646 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CHD1O14646 AC009237.14-201ENST00000609975 1594 ntBASIC30.53■■■□□ 2.48
CHD1O14646 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CHD1O14646 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC30.53■■■□□ 2.48
CHD1O14646 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC30.53■■■□□ 2.48
CHD1O14646 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CHD1O14646 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
CHD1O14646 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC30.53■■■□□ 2.48
CHD1O14646 AC092910.1-201ENST00000482027 1129 ntBASIC30.53■■■□□ 2.48
CHD1O14646 ALG1L5P-201ENST00000482043 771 ntBASIC30.53■■■□□ 2.48
CHD1O14646 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC30.53■■■□□ 2.48
CHD1O14646 AC009533.2-201ENST00000543664 586 ntBASIC30.53■■■□□ 2.48
CHD1O14646 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
CHD1O14646 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CHD1O14646 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CHD1O14646 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC30.52■■■□□ 2.48
CHD1O14646 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CHD1O14646 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
CHD1O14646 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
CHD1O14646 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
CHD1O14646 RPS2P1-201ENST00000434010 821 ntBASIC30.52■■■□□ 2.48
CHD1O14646 AC002347.1-201ENST00000569543 541 ntBASIC30.52■■■□□ 2.48
CHD1O14646 MIR3687-2-201ENST00000577708 61 ntBASIC30.52■■■□□ 2.48
CHD1O14646 MIR3687-1-201ENST00000614492 61 ntBASIC30.52■■■□□ 2.48
CHD1O14646 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
CHD1O14646 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CHD1O14646 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CHD1O14646 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC30.51■■■□□ 2.48
CHD1O14646 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
CHD1O14646 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
CHD1O14646 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC30.51■■■□□ 2.48
CHD1O14646 AC021087.4-201ENST00000563761 564 ntBASIC30.51■■■□□ 2.47
CHD1O14646 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CHD1O14646 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC30.51■■■□□ 2.47
CHD1O14646 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CHD1O14646 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CHD1O14646 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
CHD1O14646 HTR5BP-201ENST00000430851 1154 ntBASIC30.5■■■□□ 2.47
CHD1O14646 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC30.5■■■□□ 2.47
CHD1O14646 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
CHD1O14646 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CHD1O14646 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CHD1O14646 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CHD1O14646 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC30.5■■■□□ 2.47
CHD1O14646 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
CHD1O14646 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CHD1O14646 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CHD1O14646 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CHD1O14646 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CHD1O14646 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CHD1O14646 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CHD1O14646 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC30.49■■■□□ 2.47
CHD1O14646 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
CHD1O14646 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC30.49■■■□□ 2.47
CHD1O14646 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC30.49■■■□□ 2.47
CHD1O14646 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC30.49■■■□□ 2.47
CHD1O14646 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CHD1O14646 MTDHP3-201ENST00000594186 672 ntBASIC30.49■■■□□ 2.47
CHD1O14646 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CHD1O14646 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC30.49■■■□□ 2.47
CHD1O14646 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC30.49■■■□□ 2.47
CHD1O14646 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC30.48■■■□□ 2.47
CHD1O14646 AC133561.1-201ENST00000568600 2415 ntBASIC30.48■■■□□ 2.47
CHD1O14646 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC30.48■■■□□ 2.47
CHD1O14646 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CHD1O14646 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC30.48■■■□□ 2.47
CHD1O14646 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC30.48■■■□□ 2.47
CHD1O14646 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC30.48■■■□□ 2.47
CHD1O14646 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC30.48■■■□□ 2.47
CHD1O14646 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC30.48■■■□□ 2.47
CHD1O14646 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CHD1O14646 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
CHD1O14646 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC30.48■■■□□ 2.47
CHD1O14646 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC30.48■■■□□ 2.47
CHD1O14646 RCC2P3-201ENST00000418112 1537 ntBASIC30.48■■■□□ 2.47
CHD1O14646 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CHD1O14646 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CHD1O14646 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
CHD1O14646 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC30.48■■■□□ 2.47
CHD1O14646 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
CHD1O14646 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC30.48■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms