Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COPEO14579 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
COPEO14579 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COPEO14579 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COPEO14579 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.88■□□□□ 0.61
COPEO14579 LTB4R2-202ENST00000528054 3092 ntBASIC18.88■□□□□ 0.61
COPEO14579 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
COPEO14579 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COPEO14579 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COPEO14579 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
COPEO14579 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.88■□□□□ 0.61
COPEO14579 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COPEO14579 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COPEO14579 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COPEO14579 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COPEO14579 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPEO14579 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPEO14579 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COPEO14579 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPEO14579 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPEO14579 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPEO14579 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COPEO14579 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
COPEO14579 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
COPEO14579 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.87■□□□□ 0.61
COPEO14579 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COPEO14579 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COPEO14579 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.87■□□□□ 0.61
COPEO14579 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COPEO14579 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.87■□□□□ 0.61
COPEO14579 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.87■□□□□ 0.61
COPEO14579 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.87■□□□□ 0.61
COPEO14579 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
COPEO14579 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
COPEO14579 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.87■□□□□ 0.61
COPEO14579 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.87■□□□□ 0.61
COPEO14579 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPEO14579 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.87■□□□□ 0.61
COPEO14579 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.87■□□□□ 0.61
COPEO14579 AL121829.2-201ENST00000620908 328 ntBASIC18.87■□□□□ 0.61
COPEO14579 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPEO14579 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COPEO14579 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
COPEO14579 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.87■□□□□ 0.61
COPEO14579 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
COPEO14579 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COPEO14579 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.86■□□□□ 0.61
COPEO14579 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
COPEO14579 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COPEO14579 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COPEO14579 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COPEO14579 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COPEO14579 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
COPEO14579 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
COPEO14579 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COPEO14579 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.86■□□□□ 0.61
COPEO14579 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
COPEO14579 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
COPEO14579 CDCA4P2-201ENST00000441182 718 ntBASIC18.86■□□□□ 0.61
COPEO14579 AC026185.1-201ENST00000445748 174 ntBASIC18.86■□□□□ 0.61
COPEO14579 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.86■□□□□ 0.61
COPEO14579 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.86■□□□□ 0.61
COPEO14579 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.86■□□□□ 0.61
COPEO14579 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.86■□□□□ 0.61
COPEO14579 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.86■□□□□ 0.61
COPEO14579 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
COPEO14579 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
COPEO14579 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COPEO14579 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
COPEO14579 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COPEO14579 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COPEO14579 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
COPEO14579 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
COPEO14579 AL162741.1-201ENST00000565563 1558 ntBASIC18.85■□□□□ 0.61
COPEO14579 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COPEO14579 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COPEO14579 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
COPEO14579 OR6D1P-202ENST00000641007 5290 ntBASIC18.85■□□□□ 0.61
COPEO14579 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COPEO14579 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COPEO14579 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COPEO14579 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COPEO14579 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.85■□□□□ 0.61
COPEO14579 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
COPEO14579 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
COPEO14579 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COPEO14579 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COPEO14579 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.85■□□□□ 0.61
COPEO14579 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.85■□□□□ 0.61
COPEO14579 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.85■□□□□ 0.61
COPEO14579 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.85■□□□□ 0.61
COPEO14579 MIR5787-201ENST00000611784 55 ntBASIC18.85■□□□□ 0.61
COPEO14579 AC120498.8-201ENST00000614275 531 ntBASIC18.85■□□□□ 0.61
COPEO14579 HLA-B-256ENST00000639848 1089 ntBASIC18.85■□□□□ 0.61
COPEO14579 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
COPEO14579 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
COPEO14579 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.85■□□□□ 0.61
COPEO14579 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.85■□□□□ 0.61
COPEO14579 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COPEO14579 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms