Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.99■□□□□ 0.47
RTCAO00442 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTCAO00442 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTCAO00442 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTCAO00442 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RTCAO00442 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.99■□□□□ 0.47
RTCAO00442 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RTCAO00442 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RTCAO00442 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RTCAO00442 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.99■□□□□ 0.47
RTCAO00442 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTCAO00442 AL596275.1-201ENST00000423464 877 ntBASIC17.99■□□□□ 0.47
RTCAO00442 AL390955.1-201ENST00000428694 934 ntBASIC17.99■□□□□ 0.47
RTCAO00442 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTCAO00442 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.99■□□□□ 0.47
RTCAO00442 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.99■□□□□ 0.47
RTCAO00442 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTCAO00442 AP000525.1-201ENST00000608286 694 ntBASIC17.99■□□□□ 0.47
RTCAO00442 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTCAO00442 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTCAO00442 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTCAO00442 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTCAO00442 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTCAO00442 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTCAO00442 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.99■□□□□ 0.47
RTCAO00442 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.99■□□□□ 0.47
RTCAO00442 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RTCAO00442 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.99■□□□□ 0.47
RTCAO00442 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
RTCAO00442 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTCAO00442 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.99■□□□□ 0.47
RTCAO00442 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTCAO00442 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTCAO00442 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTCAO00442 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTCAO00442 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.98■□□□□ 0.47
RTCAO00442 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTCAO00442 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.98■□□□□ 0.47
RTCAO00442 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTCAO00442 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.98■□□□□ 0.47
RTCAO00442 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.98■□□□□ 0.47
RTCAO00442 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTCAO00442 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.98■□□□□ 0.47
RTCAO00442 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.98■□□□□ 0.47
RTCAO00442 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTCAO00442 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RTCAO00442 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RTCAO00442 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.98■□□□□ 0.47
RTCAO00442 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.98■□□□□ 0.47
RTCAO00442 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RTCAO00442 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.98■□□□□ 0.47
RTCAO00442 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
RTCAO00442 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.98■□□□□ 0.47
RTCAO00442 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RTCAO00442 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RTCAO00442 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTCAO00442 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RTCAO00442 AL512353.2-201ENST00000448759 1962 ntBASIC17.98■□□□□ 0.47
RTCAO00442 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
RTCAO00442 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RTCAO00442 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTCAO00442 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTCAO00442 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.98■□□□□ 0.47
RTCAO00442 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTCAO00442 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTCAO00442 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTCAO00442 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.98■□□□□ 0.47
RTCAO00442 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RTCAO00442 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTCAO00442 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.98■□□□□ 0.47
RTCAO00442 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTCAO00442 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTCAO00442 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTCAO00442 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTCAO00442 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTCAO00442 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.97■□□□□ 0.47
RTCAO00442 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RTCAO00442 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTCAO00442 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.97■□□□□ 0.47
RTCAO00442 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTCAO00442 UNC93B2-201ENST00000285383 730 ntBASIC17.97■□□□□ 0.47
RTCAO00442 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTCAO00442 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.97■□□□□ 0.47
RTCAO00442 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.97■□□□□ 0.47
RTCAO00442 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTCAO00442 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.97■□□□□ 0.47
RTCAO00442 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.97■□□□□ 0.47
RTCAO00442 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.97■□□□□ 0.47
RTCAO00442 AC083906.6-201ENST00000641366 219 ntBASIC17.97■□□□□ 0.47
RTCAO00442 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTCAO00442 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTCAO00442 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTCAO00442 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTCAO00442 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTCAO00442 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTCAO00442 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTCAO00442 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.97■□□□□ 0.47
RTCAO00442 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.97■□□□□ 0.47
RTCAO00442 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTCAO00442 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms