Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 AC134043.2-201ENST00000624206 2238 ntBASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 VMO1-204ENST00000441199 741 ntTSL 2 BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV13-2A0A0B4J235 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
TRAV13-2A0A0B4J235 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRAV13-2A0A0B4J235 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.46□□□□□ -0.42
TRAV13-2A0A0B4J235 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRAV13-2A0A0B4J235 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRAV13-2A0A0B4J235 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.42
TRAV13-2A0A0B4J235 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TRAV13-2A0A0B4J235 UBQLN4P1-201ENST00000461599 1801 ntBASIC12.46□□□□□ -0.42
TRAV13-2A0A0B4J235 CYP21A1P-202ENST00000354927 1481 ntBASIC12.46□□□□□ -0.42
TRAV13-2A0A0B4J235 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRAV13-2A0A0B4J235 AC141586.5-201ENST00000624546 2050 ntBASIC12.46□□□□□ -0.42
TRAV13-2A0A0B4J235 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRAV13-2A0A0B4J235 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 COBL-210ENST00000632460 1941 ntTSL 5 BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 OR2A1-AS1-204ENST00000470435 602 ntBASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 SLC7A5P1-201ENST00000568957 537 ntBASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 AC008764.7-201ENST00000593779 1081 ntBASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 CEP83-AS1-201ENST00000623122 2482 ntBASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV13-2A0A0B4J235 EML3-212ENST00000494176 2901 ntTSL 2 BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 EML3-216ENST00000529309 2909 ntTSL 2 BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRAV13-2A0A0B4J235 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms